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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3413340 |
| Transcript ID | Lj2g3v3413340.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chloride channel protein CLC-e-like [Glycine max] gi|356554044|ref|XP_003545359.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 105 | 105 | – | – | |
| PANTHER | 94 | 523 | 430 | 4.90E-186 | – | |
| PANTHER | 94 | 523 | 430 | 4.90E-186 | – | |
| SUPERFAMILY | 99 | 515 | 417 | 4.19E-78 | ||
| Phobius | 106 | 128 | 23 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Gene3D | 107 | 515 | 409 | 4.20E-83 | ||
| CDD | 114 | 508 | 395 | 1.14E-74 | – | |
| Phobius | 129 | 155 | 27 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 156 | 176 | 21 | – | – | |
| Phobius | 177 | 231 | 55 | – | – | |
| Pfam | 182 | 512 | 331 | 6.40E-66 | ||
| PRINTS | 189 | 208 | 20 | 3.40E-15 | ||
| Phobius | 232 | 256 | 25 | – | – | |
| TMHMM | 232 | 254 | 23 | – | – | |
| Phobius | 257 | 275 | 19 | – | – | |
| Phobius | 276 | 293 | 18 | – | – | |
| Phobius | 294 | 313 | 20 | – | – | |
| TMHMM | 312 | 334 | 23 | – | – | |
| Phobius | 314 | 337 | 24 | – | – | |
| Phobius | 338 | 356 | 19 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 357 | 377 | 21 | – | – | |
| Phobius | 378 | 396 | 19 | – | – | |
| Phobius | 397 | 416 | 20 | – | – | |
| TMHMM | 397 | 419 | 23 | – | – | |
| Phobius | 417 | 421 | 5 | – | – | |
| PRINTS | 417 | 437 | 21 | 3.40E-15 | ||
| Phobius | 422 | 444 | 23 | – | – | |
| TMHMM | 426 | 445 | 20 | – | – | |
| Phobius | 445 | 463 | 19 | – | – | |
| PRINTS | 462 | 478 | 17 | 3.40E-15 | ||
| Phobius | 464 | 488 | 25 | – | – | |
| TMHMM | 465 | 487 | 23 | – | – | |
| PRINTS | 480 | 499 | 20 | 3.40E-15 | ||
| Phobius | 489 | 493 | 5 | – | – | |
| TMHMM | 494 | 513 | 20 | – | – | |
| Phobius | 494 | 511 | 18 | – | – | |
| Phobius | 512 | 729 | 218 | – | – | |
| PANTHER | 565 | 729 | 165 | 4.90E-186 | – | |
| PANTHER | 565 | 729 | 165 | 4.90E-186 | – | |
| SUPERFAMILY | 582 | 710 | 129 | 9.13E-15 | – | |
| Gene3D | 587 | 698 | 112 | 7.90E-14 | ||
| Pfam | 587 | 638 | 52 | 8.00E-05 | ||
| ProSiteProfiles | 591 | 647 | 57 | 9.771 | ||
| SMART | 594 | 642 | 49 | 0.68 | ||
| ProSiteProfiles | 666 | 727 | 62 | 7.001 | ||
| SMART | 669 | 720 | 52 | 15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Voltage-gated chloride channel activity | Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Chloride transport | The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v3413340.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3413340.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.