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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0030660 |
| Transcript ID | Lj3g3v0030660.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like isoform X1 [Cicer arietinum] gi|502080661|ref|XP_004486635.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 430 | 410 | 4.40E-245 | – | |
| PANTHER | 21 | 430 | 410 | 4.40E-245 | – | |
| ProSiteProfiles | 76 | 110 | 35 | 5.919 | ||
| ProSiteProfiles | 112 | 146 | 35 | 7.629 | ||
| Gene3D | 125 | 163 | 39 | 4.80E-04 | ||
| ProSiteProfiles | 186 | 220 | 35 | 9.756 | ||
| Pfam | 189 | 218 | 30 | 7.70E-04 | ||
| TIGRFAM | 189 | 221 | 33 | 1.30E-05 | ||
| ProSiteProfiles | 221 | 255 | 35 | 9.361 | ||
| Gene3D | 224 | 327 | 104 | 4.80E-04 | ||
| Pfam | 243 | 302 | 60 | 3.30E-15 | ||
| ProSiteProfiles | 256 | 290 | 35 | 11.137 | ||
| TIGRFAM | 258 | 291 | 34 | 2.90E-04 | ||
| ProSiteProfiles | 291 | 325 | 35 | 11.477 | ||
| TIGRFAM | 293 | 327 | 35 | 1.20E-07 | ||
| Pfam | 346 | 406 | 61 | 2.30E-08 | ||
| ProSiteProfiles | 358 | 392 | 35 | 8.802 | ||
| TIGRFAM | 361 | 394 | 34 | 1.50E-04 | ||
| ProSiteProfiles | 393 | 427 | 35 | 10.709 | ||
| Gene3D | 394 | 416 | 23 | 4.80E-04 | ||
| TIGRFAM | 396 | 427 | 32 | 0.0019 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v0030660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0030660.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.