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Lj3g3v0397150.1

Overview

Field Value
Gene ID Lj3g3v0397150
Transcript ID Lj3g3v0397150.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: GTPase obg-like [Glycine max] gi|356495244|ref|XP_003516489.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11702:SF31
1 33 33 5.00E-114 –
MobiDBLite
mobidb-lite
1 22 22 – –
PANTHER
PTHR11702
1 33 33 5.00E-114 –
PANTHER
PTHR11702:SF31
51 242 192 5.00E-114 –
PANTHER
PTHR11702
51 242 192 5.00E-114 –
Gene3D
G3DSA:3.40.50.300
67 243 177 3.90E-47
IPR027417
ProSiteProfiles
PS51710
67 239 173 60.253
IPR031167
CDD
cd01898
67 238 172 2.58E-77 –
SUPERFAMILY
SSF52540
68 237 170 1.61E-43
IPR027417
Pfam
PF01926
69 194 126 8.30E-25
IPR006073
PRINTS
PR00326
69 89 21 2.00E-29
IPR006073
PRINTS
PR00326
90 108 19 2.00E-29
IPR006073
PRINTS
PR00326
117 132 16 2.00E-29
IPR006073
PRINTS
PR00326
134 152 19 2.00E-29
IPR006073

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj3g3v0397150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0397150.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.