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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031167
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We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.828s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0057889.1
n.a. PREDICTED: GTPase obg-like [Glycine max] gi|356551819|ref|XP_003544271.1| chr0 19047624 19053568 +
2 domain predictions
1 GO term
Lj1g3v1219010.1
n.a. PREDICTED: developmentally-regulated GTP-binding protein 1-like [Glycine max] gi|356516297|ref|XP_003526832.1| chr1 14820836 14828158 +
2 domain predictions
1 GO term
Lj2g3v1645560.1
n.a. PREDICTED: nucleolar GTP-binding protein 1-like [Glycine max] gi|356538952|ref|XP_003537964.1| chr2 25623276 25626174 -
2 domain predictions
1 GO term
Lj3g3v0394900.1
n.a. PREDICTED: GTP-dependent nucleic acid-binding protein engD [Glycine max] gi|356526427|ref|XP_003531819.1| chr3 3220755 3226862 +
2 domain predictions
1 GO term
Lj3g3v0394900.2
n.a. PREDICTED: GTP-dependent nucleic acid-binding protein engD [Glycine max] gi|356526427|ref|XP_003531819.1| chr3 3220755 3227851 +
2 domain predictions
1 GO term
Lj3g3v0397150.1
n.a. PREDICTED: GTPase obg-like [Glycine max] gi|356495244|ref|XP_003516489.1| chr3 3325432 3327010 -
2 domain predictions
1 GO term
Lj3g3v0397150.2
n.a. PREDICTED: GTPase obg-like [Cicer arietinum] gi|502115632|ref|XP_004495251.1| chr3 3325432 3328953 -
2 domain predictions
1 GO term
Lj3g3v2634540.1
n.a. Developmentally regulated G-protein 1 isoform 1 [Theobroma cacao] gi|508779961|gb|EOY27217.1| chr3 32249702 32255838 -
2 domain predictions
1 GO term
Lj4g3v1327810.1
n.a. PREDICTED: nucleolar GTP-binding protein 1-like [Glycine max] gi|356538952|ref|XP_003537964.1| chr4 19690984 19693090 -
2 domain predictions
1 GO term
Lj5g3v0144410.1
n.a. PREDICTED: GTPase obg-like [Glycine max] gi|356564323|ref|XP_003550404.1| chr5 1475162 1480442 +
2 domain predictions
1 GO term
Lj6g3v1641150.1
n.a. PREDICTED: obg-like ATPase 1-like [Glycine max] gi|356555899|ref|XP_003546267.1| chr6 18508777 18516818 -
2 domain predictions
1 GO term
Lj6g3v1641150.2
n.a. PREDICTED: obg-like ATPase 1-like [Glycine max] gi|356555899|ref|XP_003546267.1| chr6 18508777 18516818 -
2 domain predictions
1 GO term
Lj6g3v1931780.1
n.a. PREDICTED: GTPase obg-like isoform 1 [Glycine max] gi|356549083|ref|XP_003542927.1| chr6 21914622 21919659 +
2 domain predictions
1 GO term
LotjaGi1g1v0312100.1
n.a. GTPase obg; TAIR: AT4G39520.1 GTP-binding protein-like protein; Swiss-Prot: sp|Q9SVA6|DRG3_ARATH Developmentally-regulated G-protein 3; TrEMBL-Plants: tr|A0A1J7H966|A0A1J7H966_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0312100 LjG1.1_chr1 75614886 75625331 +
2 domain predictions
1 GO term
LotjaGi2g1v0356500.1
n.a. Nucleolar GTP-binding protein 1; TAIR: AT1G50920.1 Nucleolar GTP-binding protein; Swiss-Prot: sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1; TrEMBL-Plants: tr|A0A0B2R041|A0A0B2R041_GLYSO Nucleolar GTP-binding protein 1; Found in the gene: LotjaGi2g1v0356500 LjG1.1_chr2 83295684 83299503 -
2 domain predictions
1 GO term
LotjaGi2g1v0356500.2
n.a. Nucleolar GTP-binding protein 1; TAIR: AT1G50920.1 Nucleolar GTP-binding protein; Swiss-Prot: sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1; TrEMBL-Plants: tr|A0A0B2R041|A0A0B2R041_GLYSO Nucleolar GTP-binding protein 1; Found in the gene: LotjaGi2g1v0356500 LjG1.1_chr2 83296752 83298863 -
2 domain predictions
1 GO term
LotjaGi2g1v0356500.3
n.a. Nucleolar GTP-binding protein 1; TAIR: AT1G50920.1 Nucleolar GTP-binding protein; Swiss-Prot: sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1; TrEMBL-Plants: tr|A0A0B2R041|A0A0B2R041_GLYSO Nucleolar GTP-binding protein 1; Found in the gene: LotjaGi2g1v0356500 LjG1.1_chr2 83296989 83299004 -
2 domain predictions
1 GO term
LotjaGi3g1v0034900.1
n.a. Obg-like ATPase 1; TAIR: AT1G56050.1 GTP-binding protein-like protein; Swiss-Prot: sp|P37518|YCHF_BACSU Ribosome-binding ATPase YchF; TrEMBL-Plants: tr|I3SBQ5|I3SBQ5_LOTJA Obg-like ATPase 1; Found in the gene: LotjaGi3g1v0034900 LjG1.1_chr3 3707414 3714896 +
2 domain predictions
1 GO term
LotjaGi3g1v0034900.2
n.a. Obg-like ATPase 1; TAIR: AT1G56050.1 GTP-binding protein-like protein; Swiss-Prot: sp|P37518|YCHF_BACSU Ribosome-binding ATPase YchF; TrEMBL-Plants: tr|I3SBQ5|I3SBQ5_LOTJA Obg-like ATPase 1; Found in the gene: LotjaGi3g1v0034900 LjG1.1_chr3 3707524 3712375 +
2 domain predictions
1 GO term
LotjaGi3g1v0036000.1
n.a. GTPase obg; TAIR: AT1G07615.1 GTP-binding protein Obg/CgtA; Swiss-Prot: sp|F4HSD4|OBGM_ARATH Probable GTP-binding protein OBGM, mitochondrial; TrEMBL-Plants: tr|G7I2N7|G7I2N7_MEDTR Obg family GTPase CgtA; Found in the gene: LotjaGi3g1v0036000 LjG1.1_chr3 3886493 3890057 +
3 domain predictions
1 GO term
LotjaGi3g1v0416000.1
n.a. GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 LjG1.1_chr3 82175605 82182465 -
2 domain predictions
1 GO term
LotjaGi3g1v0416000.3
n.a. GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 LjG1.1_chr3 82176485 82182208 -
2 domain predictions
1 GO term
LotjaGi3g1v0416000.4
n.a. GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 LjG1.1_chr3 82176485 82182208 -
2 domain predictions
1 GO term
LotjaGi4g1v0218400.1
n.a. Nucleolar GTP-binding protein 1; TAIR: AT1G50920.1 Nucleolar GTP-binding protein; Swiss-Prot: sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1; TrEMBL-Plants: tr|A0A0B2R041|A0A0B2R041_GLYSO Nucleolar GTP-binding protein 1; Found in the gene: LotjaGi4g1v0218400 LjG1.1_chr4 51257308 51262062 -
2 domain predictions
1 GO term
LotjaGi4g1v0218400.2
n.a. Nucleolar GTP-binding protein 1; TAIR: AT1G50920.1 Nucleolar GTP-binding protein; Swiss-Prot: sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1; TrEMBL-Plants: tr|A0A0B2R041|A0A0B2R041_GLYSO Nucleolar GTP-binding protein 1; Found in the gene: LotjaGi4g1v0218400 LjG1.1_chr4 51259478 51261604 -
2 domain predictions
1 GO term
LotjaGi4g1v0218400.3
n.a. Nucleolar GTP-binding protein 1; TAIR: AT1G50920.1 Nucleolar GTP-binding protein; Swiss-Prot: sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1; TrEMBL-Plants: tr|A0A0B2R041|A0A0B2R041_GLYSO Nucleolar GTP-binding protein 1; Found in the gene: LotjaGi4g1v0218400 LjG1.1_chr4 51259478 51262047 -
2 domain predictions
1 GO term
LotjaGi4g1v0218400.4
n.a. Nucleolar GTP-binding protein 1; TAIR: AT1G50920.1 Nucleolar GTP-binding protein; Swiss-Prot: sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1; TrEMBL-Plants: tr|A0A0B2R041|A0A0B2R041_GLYSO Nucleolar GTP-binding protein 1; Found in the gene: LotjaGi4g1v0218400 LjG1.1_chr4 51259715 51261745 -
2 domain predictions
1 GO term
LotjaGi5g1v0011200.1
n.a. GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp|Q851Q6|OBGC2_ORYSJ Probable GTP-binding protein OBGC2; TrEMBL-Plants: tr|A0A1J7HST2|A0A1J7HST2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0011200 LjG1.1_chr5 2572397 2578694 -
3 domain predictions
1 GO term
LotjaGi6g1v0271200.1
n.a. Obg-like ATPase 1; TAIR: AT1G30580.1 GTP binding protein; Swiss-Prot: sp|Q9SA73|OLA1_ARATH Obg-like ATPase 1; TrEMBL-Plants: tr|I3T7Y1|I3T7Y1_LOTJA Obg-like ATPase 1; Found in the gene: LotjaGi6g1v0271200 LjG1.1_chr6 58540422 58548994 +
2 domain predictions
1 GO term
LotjaGi6g1v0307800.1
n.a. GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp|Q8L7L0|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr|A0A1J7H1V8|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800 LjG1.1_chr6 62502460 62507964 +
3 domain predictions
1 GO term
LotjaGi6g1v0307800.2
n.a. GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp|Q8L7L0|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr|A0A1J7H1V8|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800 LjG1.1_chr6 62502466 62507826 +
3 domain predictions
1 GO term