Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj3g3v0423950.1

Overview

Field Value
Gene ID Lj3g3v0423950
Transcript ID Lj3g3v0423950.1
Lotus japonicus genome version MG20 v3.0
Description disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11017
2 438 437 5.70E-186 –
PANTHER
PTHR11017:SF162
2 438 437 5.70E-186 –
SUPERFAMILY
SSF52540
8 268 261 2.60E-57
IPR027417
Gene3D
G3DSA:3.40.50.300
26 164 139 2.70E-09
IPR027417
Pfam
PF00931
27 272 246 4.60E-25
IPR002182
SMART
SM00382
42 176 135 9.00E-04
IPR003593
PRINTS
PR00364
45 60 16 2.00E-22 –
PRINTS
PR00364
116 130 15 2.00E-22 –
PRINTS
PR00364
209 223 15 2.00E-22 –
SUPERFAMILY
SSF52058
313 668 356 2.21E-50
IPR032675
Gene3D
G3DSA:3.80.10.10
336 454 119 2.80E-12
IPR032675
Gene3D
G3DSA:3.80.10.10
455 669 215 6.50E-34
IPR032675
PANTHER
PTHR11017:SF162
486 529 44 5.70E-186 –
PANTHER
PTHR11017
486 529 44 5.70E-186 –
PANTHER
PTHR11017
641 875 235 5.70E-186 –
PANTHER
PTHR11017:SF162
641 875 235 5.70E-186 –
PRINTS
PR00364
647 663 17 2.00E-22 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj3g3v0423950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0423950.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.