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Lj3g3v0429690.1

Overview

Field Value
Gene ID Lj3g3v0429690
Transcript ID Lj3g3v0429690.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502155333|ref|XP_004510036.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 29 29 – –
PANTHER
PTHR11566
6 388 383 0
IPR022812
PANTHER
PTHR11566:SF44
6 388 383 0 –
SMART
SM00053
26 269 244 1.10E-08
IPR001401
SUPERFAMILY
SSF52540
27 341 315 2.38E-40
IPR027417
Gene3D
G3DSA:3.40.50.300
30 341 312 9.30E-58
IPR027417
ProSiteProfiles
PS51718
46 333 288 75.683
IPR030381
CDD
cd08771
47 333 287 4.68E-69 –
PRINTS
PR00195
49 67 19 1.00E-14
IPR022812
Pfam
PF00350
52 232 181 2.30E-34
IPR022812
PRINTS
PR00195
74 91 18 1.00E-14
IPR022812
PRINTS
PR00195
152 169 18 1.00E-14
IPR022812
PRINTS
PR00195
202 220 19 1.00E-14
IPR022812
PRINTS
PR00195
221 237 17 1.00E-14
IPR022812
PANTHER
PTHR11566
419 804 386 0
IPR022812
PANTHER
PTHR11566:SF44
419 804 386 0 –
MobiDBLite
mobidb-lite
604 668 65 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 20

Expression data

Expression pattern

Expression pattern of Lj3g3v0429690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0429690.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.