Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj3g3v0462310.1

Overview

Field Value
Gene ID Lj3g3v0462310
Transcript ID Lj3g3v0462310.1
Lotus japonicus genome version MG20 v3.0
Description dynamin homolog [Astragalus sinicus] gi|6625788|gb|AAF19398.1|AF203882_1
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11566
1 299 299 0
IPR022812
PANTHER
PTHR11566:SF69
1 299 299 0 –
Gene3D
G3DSA:3.40.50.300
2 90 89 1.40E-06
IPR027417
Pfam
PF01031
39 273 235 2.00E-23
IPR000375
MobiDBLite
mobidb-lite
286 356 71 – –
Gene3D
G3DSA:2.30.29.30
352 466 115 3.20E-10
IPR011993
PANTHER
PTHR11566
355 525 171 0
IPR022812
PANTHER
PTHR11566:SF69
355 525 171 0 –
ProSiteProfiles
PS50003
357 462 106 8.92
IPR001849
SMART
SM00233
358 464 107 4.80E-05
IPR001849
SUPERFAMILY
SSF50729
358 471 114 6.70E-13
IPR011993
Pfam
PF00169
362 461 100 3.70E-06
IPR001849
MobiDBLite
mobidb-lite
390 417 28 – –
MobiDBLite
mobidb-lite
471 492 22 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 22

Expression data

Expression pattern

Expression pattern of Lj3g3v0462310.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0462310.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.