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Lj3g3v0797550.1

Overview

Field Value
Gene ID Lj3g3v0797550
Transcript ID Lj3g3v0797550.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: CTD small phosphatase-like protein 2-like isoform X1 [Cicer arietinum] gi|502127193|ref|XP_004499597.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 32 32 – –
PANTHER
PTHR12210
98 469 372 2.30E-140 –
PANTHER
PTHR12210:SF74
98 469 372 2.30E-140 –
MobiDBLite
mobidb-lite
103 136 34 – –
ProSiteProfiles
PS50969
293 451 159 44.366
IPR004274
Gene3D
G3DSA:3.40.50.1000
294 462 169 1.20E-57
IPR023214
SUPERFAMILY
SSF56784
294 462 169 4.96E-54
IPR023214
SMART
SM00577
296 439 144 3.30E-56
IPR004274
TIGRFAM
TIGR02251
298 461 164 2.50E-59
IPR011948
Pfam
PF03031
299 458 160 4.20E-52
IPR004274

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj3g3v0797550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0797550.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.