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Lj3g3v0933420.1

Overview

Field Value
Gene ID Lj3g3v0933420
Transcript ID Lj3g3v0933420.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ATPase family gene 2 protein-like [Vitis vinifera] gi|225450283|ref|XP_002267624.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam
PF14363
28 86 59 1.20E-07
IPR025753
PANTHER
PTHR23070:SF43
30 311 282 4.10E-186 –
PANTHER
PTHR23070
30 311 282 4.10E-186 –
SUPERFAMILY
SSF52540
106 256 151 4.41E-27
IPR027417
Gene3D
G3DSA:3.40.50.300
179 309 131 1.30E-23
IPR027417
CDD
cd00009
196 257 62 6.55E-07 –
Pfam
PF00004
200 261 62 4.10E-06
IPR003959
MobiDBLite
mobidb-lite
269 292 24 – –
SUPERFAMILY
SSF52540
283 309 27 4.41E-27
IPR027417

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj3g3v0933420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0933420.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.