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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1061300 |
| Transcript ID | Lj3g3v1061300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cicer arietinum] gi|502089840|ref|XP_004489036.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 19 | 358 | 340 | 24.251 | ||
| ProSiteProfiles | 19 | 52 | 34 | 9.794 | ||
| SMART | 19 | 52 | 34 | 0.022 | ||
| SUPERFAMILY | 19 | 111 | 93 | 4.16E-28 | ||
| Gene3D | 19 | 110 | 92 | 5.10E-23 | ||
| PANTHER | 21 | 491 | 471 | 0 | – | |
| PANTHER | 21 | 491 | 471 | 0 | – | |
| Pfam | 25 | 86 | 62 | 1.80E-06 | – | |
| SMART | 53 | 86 | 34 | 0.13 | ||
| ProSiteProfiles | 53 | 86 | 34 | 6.254 | ||
| Gene3D | 140 | 244 | 105 | 6.10E-07 | ||
| SUPERFAMILY | 154 | 246 | 93 | 4.16E-28 | ||
| SMART | 211 | 244 | 34 | 0.13 | ||
| ProSiteProfiles | 211 | 244 | 34 | 7.051 | ||
| Pfam | 212 | 242 | 31 | 0.0027 | ||
| ProSiteProfiles | 257 | 290 | 34 | 7.139 | ||
| SMART | 257 | 290 | 34 | 29 | ||
| Gene3D | 261 | 372 | 112 | 8.60E-31 | ||
| Pfam | 262 | 323 | 62 | 0.0021 | – | |
| ProSiteProfiles | 291 | 324 | 34 | 8.437 | ||
| SMART | 291 | 324 | 34 | 2.30E-04 | ||
| SUPERFAMILY | 294 | 488 | 195 | 8.27E-27 | ||
| SMART | 325 | 358 | 34 | 14 | ||
| ProSiteProfiles | 325 | 358 | 34 | 5.871 | ||
| Gene3D | 392 | 488 | 97 | 9.60E-17 | ||
| CDD | 396 | 477 | 82 | 3.60E-19 | – | |
| Pfam | 396 | 484 | 89 | 3.60E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of Lj3g3v1061300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1061300.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.