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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1064840 |
| Transcript ID | Lj3g3v1064840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NHL domain-containing protein isoform 1 [Theobroma cacao] gi|508721539|gb|EOY13436.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 5 | 17 | 13 | – | – | |
| PANTHER | 18 | 273 | 256 | 2.10E-155 | – | |
| PANTHER | 18 | 273 | 256 | 2.10E-155 | – | |
| Phobius | 18 | 25 | 8 | – | – | |
| Phobius | 26 | 231 | 206 | – | – | |
| SUPERFAMILY | 58 | 171 | 114 | 7.32E-10 | – | |
| Gene3D | 59 | 218 | 160 | 2.40E-14 | ||
| Pfam | 135 | 161 | 27 | 2.50E-07 | ||
| Phobius | 232 | 253 | 22 | – | – | |
| Phobius | 254 | 273 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v1064840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1064840.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.