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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1145930 |
| Transcript ID | Lj3g3v1145930.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1-like isoform X2 [Cicer arietinum] gi|502083631|ref|XP_004487517.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | – | – | |
| SMART | 44 | 81 | 38 | 0.0029 | ||
| ProSiteProfiles | 50 | 280 | 231 | 12.051 | ||
| ProSiteProfiles | 50 | 81 | 32 | 8.604 | ||
| Gene3D | 53 | 425 | 373 | 5.70E-27 | ||
| SUPERFAMILY | 55 | 283 | 229 | 1.55E-30 | ||
| Pfam | 57 | 81 | 25 | 0.057 | ||
| SMART | 86 | 125 | 40 | 0.0039 | ||
| Pfam | 91 | 125 | 35 | 0.21 | ||
| SMART | 176 | 215 | 40 | 22 | ||
| SMART | 232 | 271 | 40 | 10 | ||
| PANTHER | 383 | 613 | 231 | 2.50E-139 | – | |
| PANTHER | 383 | 613 | 231 | 2.50E-139 | ||
| ProSiteProfiles | 458 | 613 | 156 | 35.595 | ||
| Gene3D | 459 | 613 | 155 | 2.80E-74 | ||
| Pfam | 462 | 613 | 152 | 1.20E-52 | ||
| SUPERFAMILY | 462 | 613 | 152 | 6.14E-66 | ||
| CDD | 463 | 611 | 149 | 3.13E-105 | – | |
| PRINTS | 475 | 490 | 16 | 1.90E-30 | ||
| ProSitePatterns | 496 | 513 | 18 | – | ||
| PRINTS | 501 | 513 | 13 | 1.90E-30 | ||
| PRINTS | 544 | 559 | 16 | 1.90E-30 | ||
| PRINTS | 559 | 571 | 13 | 1.90E-30 | ||
| PRINTS | 572 | 587 | 16 | 1.90E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein peptidyl-prolyl isomerization | The modification of a protein by cis-trans isomerization of a proline residue. | ||
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. |
Expression pattern of Lj3g3v1145930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1145930.1, powered by CORGI.
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