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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1204560 |
| Transcript ID | Lj3g3v1204560.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat-containing protein 9-like isoform X1 [Cicer arietinum] gi|502083492|ref|XP_004487476.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | – | – | |
| PANTHER | 15 | 257 | 243 | 1.50E-118 | – | |
| SUPERFAMILY | 15 | 254 | 240 | 4.25E-42 | ||
| PANTHER | 15 | 257 | 243 | 1.50E-118 | – | |
| Gene3D | 16 | 130 | 115 | 6.40E-27 | ||
| SMART | 40 | 61 | 22 | 1.8 | – | |
| SMART | 40 | 62 | 23 | 41 | ||
| ProSiteProfiles | 42 | 63 | 22 | 8.898 | ||
| Pfam | 42 | 81 | 40 | 2.60E-07 | ||
| SMART | 62 | 83 | 22 | 28 | – | |
| ProSiteProfiles | 64 | 85 | 22 | 7.643 | ||
| SMART | 84 | 106 | 23 | 110 | ||
| SMART | 84 | 105 | 22 | 16 | – | |
| ProSiteProfiles | 86 | 107 | 22 | 7.312 | ||
| SMART | 106 | 127 | 22 | 110 | – | |
| Pfam | 108 | 164 | 57 | 1.90E-07 | ||
| ProSiteProfiles | 108 | 129 | 22 | 7.666 | ||
| SMART | 128 | 150 | 23 | 660 | – | |
| SMART | 128 | 151 | 24 | 140 | ||
| ProSiteProfiles | 130 | 152 | 23 | 5.933 | ||
| Gene3D | 131 | 255 | 125 | 9.80E-29 | ||
| SMART | 174 | 197 | 24 | 22 | ||
| ProSiteProfiles | 176 | 197 | 22 | 6.657 | ||
| Pfam | 177 | 234 | 58 | 3.40E-08 | ||
| SMART | 197 | 218 | 22 | 18 | – | |
| ProSiteProfiles | 199 | 220 | 22 | 7.75 | ||
| SMART | 222 | 243 | 22 | 550 | – | |
| SMART | 222 | 244 | 23 | 370 | ||
| ProSiteProfiles | 224 | 245 | 22 | 5.71 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v1204560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1204560.1, powered by CORGI.
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