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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1249990 |
| Transcript ID | Lj3g3v1249990.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: lysine-specific histone demethylase 1 homolog 2-like [Glycine max] gi|356517186|ref|XP_003527270.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | – | – | |
| ProSiteProfiles | 55 | 156 | 102 | 17.297 | ||
| SUPERFAMILY | 57 | 159 | 103 | 4.12E-21 | ||
| Gene3D | 64 | 155 | 92 | 1.20E-13 | ||
| Pfam | 73 | 147 | 75 | 1.40E-11 | ||
| PANTHER | 95 | 499 | 405 | 2.40E-277 | – | |
| PANTHER | 95 | 499 | 405 | 2.40E-277 | – | |
| SUPERFAMILY | 162 | 452 | 291 | 3.88E-60 | ||
| Gene3D | 164 | 191 | 28 | 1.10E-11 | ||
| Pfam | 172 | 497 | 326 | 5.70E-55 | ||
| Gene3D | 192 | 263 | 72 | 8.10E-06 | – | |
| Gene3D | 346 | 498 | 153 | 8.00E-43 | – | |
| SUPERFAMILY | 433 | 498 | 66 | 1.64E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj3g3v1249990.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1249990.3, powered by CORGI.
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