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Lj3g3v1295690.1

Overview

Field Value
Gene ID Lj3g3v1295690
Transcript ID Lj3g3v1295690.1
Lotus japonicus genome version MG20 v3.0
Description seed maturation protein PM37 [Glycine max] gi|351724545|ref|NP_001238341.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24078:SF237
1 75 75 1.30E-264 –
PANTHER
PTHR24078
1 75 75 1.30E-264 –
SUPERFAMILY
SSF49493
39 73 35 1.23E-16
IPR008971
Gene3D
G3DSA:2.60.260.20
39 69 31 1.00E-26 –
Pfam
PF01556
42 287 246 9.50E-39
IPR002939
ProSiteProfiles
PS51188
79 163 85 24.287
IPR001305
Gene3D
G3DSA:2.10.230.10
80 161 82 1.40E-17
IPR001305
SUPERFAMILY
SSF57938
89 161 73 2.49E-17
IPR001305
Pfam
PF00684
92 158 67 2.40E-15
IPR001305
CDD
cd10719
92 158 67 5.56E-18 –
PANTHER
PTHR24078
96 362 267 1.30E-264 –
PANTHER
PTHR24078:SF237
96 362 267 1.30E-264 –
CDD
cd10747
157 290 134 7.31E-41 –
Gene3D
G3DSA:2.60.260.20
162 205 44 1.00E-26 –
SUPERFAMILY
SSF49493
164 207 44 1.23E-16
IPR008971
SUPERFAMILY
SSF49493
209 298 90 1.44E-19
IPR008971
Gene3D
G3DSA:2.60.260.20
209 288 80 8.00E-28 –
MobiDBLite
mobidb-lite
322 362 41 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0031072
Molecular function Heat shock protein binding Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
Subterm of
GO:0051082
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj3g3v1295690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1295690.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.