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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1406290 |
| Transcript ID | Lj3g3v1406290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | lipid transfer protein-like protein [Retama raetam] gi|16930759|gb|AAL32039.1|AF439280_1 |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 121 | 121 | 3.20E-44 | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 121 | 121 | 3.20E-44 | – | |
| ProSiteProfiles | 1 | 19 | 19 | 5 | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| Phobius | 18 | 26 | 9 | – | – | |
| Gene3D | 26 | 115 | 90 | 2.20E-28 | – | |
| Phobius | 27 | 122 | 96 | – | – | |
| SUPERFAMILY | 27 | 115 | 89 | 2.23E-27 | ||
| CDD | 27 | 113 | 87 | 2.30E-35 | – | |
| PRINTS | 28 | 44 | 17 | 2.20E-27 | ||
| SMART | 29 | 113 | 85 | 1.00E-13 | ||
| Pfam | 29 | 113 | 85 | 4.20E-08 | ||
| PRINTS | 48 | 62 | 15 | 2.20E-27 | ||
| PRINTS | 69 | 84 | 16 | 2.20E-27 | ||
| PRINTS | 86 | 103 | 18 | 2.20E-27 | ||
| PRINTS | 104 | 115 | 12 | 2.20E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid transport | The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of Lj3g3v1406290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1406290.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.