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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2027410 |
| Transcript ID | Lj3g3v2027410.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| Phobius | 17 | 21 | 5 | – | – | |
| Phobius | 22 | 730 | 709 | – | – | |
| PANTHER | 41 | 93 | 53 | 5.40E-114 | – | |
| PANTHER | 41 | 93 | 53 | 5.40E-114 | ||
| MobiDBLite | 111 | 149 | 39 | – | – | |
| PANTHER | 162 | 609 | 448 | 5.40E-114 | ||
| PANTHER | 162 | 609 | 448 | 5.40E-114 | – | |
| Pfam | 191 | 246 | 56 | 2.80E-07 | ||
| Pfam | 365 | 417 | 53 | 2.10E-07 | ||
| ProSiteProfiles | 509 | 545 | 37 | 10.645 | ||
| SMART | 520 | 547 | 28 | 4.80E-05 | ||
| Pfam | 521 | 541 | 21 | 1.30E-05 | ||
| MobiDBLite | 625 | 660 | 36 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj3g3v2027410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2027410.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.