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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2236930 |
| Transcript ID | Lj3g3v2236930.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pleiotropic drug resistance protein 1-like [Cicer arietinum] gi|502147693|ref|XP_004506879.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 206 | 206 | – | – | |
| PANTHER | 1 | 438 | 438 | 0 | – | |
| PANTHER | 1 | 438 | 438 | 0 | – | |
| Gene3D | 4 | 120 | 117 | 8.50E-16 | ||
| SUPERFAMILY | 4 | 124 | 121 | 2.83E-17 | ||
| Pfam | 190 | 402 | 213 | 1.10E-44 | ||
| TMHMM | 206 | 228 | 23 | – | – | |
| Phobius | 207 | 228 | 22 | – | – | |
| Phobius | 229 | 247 | 19 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 248 | 271 | 24 | – | – | |
| Phobius | 272 | 290 | 19 | – | – | |
| Phobius | 291 | 313 | 23 | – | – | |
| TMHMM | 291 | 313 | 23 | – | – | |
| Phobius | 314 | 324 | 11 | – | – | |
| Phobius | 325 | 344 | 20 | – | – | |
| TMHMM | 326 | 345 | 20 | – | – | |
| Phobius | 345 | 350 | 6 | – | – | |
| TMHMM | 350 | 372 | 23 | – | – | |
| Phobius | 351 | 372 | 22 | – | – | |
| Phobius | 373 | 432 | 60 | – | – | |
| TMHMM | 379 | 398 | 20 | – | – | |
| Pfam | 407 | 470 | 64 | 2.30E-26 | ||
| Phobius | 433 | 460 | 28 | – | – | |
| TMHMM | 435 | 457 | 23 | – | – | |
| Phobius | 461 | 557 | 97 | – | – | |
| MobiDBLite | 471 | 505 | 35 | – | – | |
| PANTHER | 507 | 557 | 51 | 0 | – | |
| PANTHER | 507 | 557 | 51 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj3g3v2236930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2236930.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.