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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013581
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 73 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 6.430s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0077779.1
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Cicer arietinum] gi|502147693|ref|XP_004506879.1| chr0 29890994 29891880 -
2 domain predictions
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Lj0g3v0252699.1
n.a. PREDICTED: pleiotropic drug resistance protein 2-like [Cicer arietinum] gi|502174313|ref|XP_004515482.1| chr0 131109876 131121879 +
2 domain predictions
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Lj1g3v1914990.1
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356515478|ref|XP_003526427.1| chr1 22803773 22810507 +
2 domain predictions
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Lj1g3v1914990.2
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356515478|ref|XP_003526427.1| chr1 22803773 22813470 +
2 domain predictions
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Lj1g3v4528450.2
n.a. Pleiotropic drug resistance protein [Medicago truncatula] gi|357510221|ref|XP_003625399.1| chr1 53355866 53366721 -
2 domain predictions
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Lj1g3v4528450.3
n.a. Pleiotropic drug resistance protein [Medicago truncatula] gi|357510221|ref|XP_003625399.1| chr1 53355866 53364884 -
2 domain predictions
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Lj1g3v4701870.1
n.a. PREDICTED: ABC transporter G family member 39-like [Cicer arietinum] gi|502111745|ref|XP_004494154.1| chr1 56100200 56106804 -
2 domain predictions
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Lj1g3v4701870.2
n.a. PREDICTED: ABC transporter G family member 39-like [Cicer arietinum] gi|502111745|ref|XP_004494154.1| chr1 56100200 56110578 -
2 domain predictions
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Lj2g3v2256310.1
n.a. PREDICTED: ABC transporter G family member 31-like [Cicer arietinum] gi|502096003|ref|XP_004490594.1| chr2 33143874 33157348 +
2 domain predictions
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Lj3g3v0128220.1
n.a. Pleiotropic drug resistance protein [Medicago truncatula] gi|357455075|ref|XP_003597818.1| chr3 929252 936636 +
2 domain predictions
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Lj3g3v0128220.2
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356555825|ref|XP_003546230.1| chr3 931422 936636 +
2 domain predictions
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Lj3g3v0275800.1
n.a. PREDICTED: ABC transporter G family member 36-like isoform X1 [Cicer arietinum] gi|502081143|ref|XP_004486779.1| chr3 1706198 1719432 +
2 domain predictions
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Lj3g3v0275800.2
n.a. PREDICTED: ABC transporter G family member 36-like isoform X1 [Cicer arietinum] gi|502081143|ref|XP_004486779.1| chr3 1706199 1719432 +
2 domain predictions
 –
Lj3g3v2236930.1
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Cicer arietinum] gi|502147693|ref|XP_004506879.1| chr3 27613112 27626324 +
2 domain predictions
 –
Lj3g3v2236930.2
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Cicer arietinum] gi|502147693|ref|XP_004506879.1| chr3 27621752 27628881 +
2 domain predictions
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Lj3g3v2318010.1
n.a. PREDICTED: ABC transporter G family member 36-like [Cicer arietinum] gi|502156086|ref|XP_004510308.1| chr3 28683414 28692959 +
2 domain predictions
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Lj4g3v1800250.1
n.a. PREDICTED: ABC transporter G family member 32-like [Cicer arietinum] gi|502151680|ref|XP_004508560.1| chr4 25446426 25456079 +
2 domain predictions
 –
Lj4g3v2249150.1
n.a. PREDICTED: pleiotropic drug resistance protein 3-like [Glycine max] gi|356565445|ref|XP_003550950.1| chr4 31036661 31047626 +
2 domain predictions
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Lj5g3v0540130.1
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356563840|ref|XP_003550166.1| chr5 6488000 6497092 +
2 domain predictions
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Lj5g3v0540170.1
n.a. Pleiotropic drug resistance protein 4 [Triticum urartu] gi|474420790|gb|EMS67534.1| chr5 6509476 6513575 +
2 domain predictions
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Lj5g3v1772520.1
n.a. PREDICTED: pleiotropic drug resistance protein 2-like [Cicer arietinum] gi|502118284|ref|XP_004496191.1| chr5 25198260 25209213 -
2 domain predictions
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LotjaGi1g1v0120700.1
n.a. ABC transporter family protein; TAIR: AT2G29940.1 pleiotropic drug resistance 3; Swiss-Prot: sp|Q7PC88|AB31G_ARATH ABC transporter G family member 31; TrEMBL-Plants: tr|K7M810|K7M810_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0120700 LjG1.1_chr1 19030745 19044270 -
2 domain predictions
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LotjaGi1g1v0120700.2
n.a. ABC transporter family protein; TAIR: AT2G29940.1 pleiotropic drug resistance 3; Swiss-Prot: sp|Q7PC88|AB31G_ARATH ABC transporter G family member 31; TrEMBL-Plants: tr|A0A0S3RLX9|A0A0S3RLX9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0120700 LjG1.1_chr1 19031189 19041468 -
2 domain predictions
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LotjaGi1g1v0387600.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|I1K8Y7|I1K8Y7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0387600 LjG1.1_chr1 87085497 87096881 +
2 domain predictions
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LotjaGi1g1v0678700.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT2G36380.1 pleiotropic drug resistance 6; Swiss-Prot: sp|Q7PC87|AB34G_ARATH ABC transporter G family member 34; TrEMBL-Plants: tr|K7MZ73|K7MZ73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0678700 LjG1.1_chr1 124509808 124518228 +
2 domain predictions
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LotjaGi1g1v0678700.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G66950.1 pleiotropic drug resistance 11; Swiss-Prot: sp|Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2; TrEMBL-Plants: tr|K7MZ72|K7MZ72_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0678700 LjG1.1_chr1 124510851 124514237 +
2 domain predictions
 –
LotjaGi1g1v0678800.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT2G36380.1 pleiotropic drug resistance 6; Swiss-Prot: sp|Q7PC87|AB34G_ARATH ABC transporter G family member 34; TrEMBL-Plants: tr|A0A0B2QFQ3|A0A0B2QFQ3_GLYSO ABC transporter G family member 39; Found in the gene: LotjaGi1g1v0678800 LjG1.1_chr1 124520281 124528254 +
2 domain predictions
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LotjaGi1g1v0703000.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0703000 LjG1.1_chr1 127122441 127133930 +
2 domain predictions
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LotjaGi1g1v0703000.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.2 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0703000 LjG1.1_chr1 127124902 127133412 +
2 domain predictions
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LotjaGi1g1v0703000.3
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.2 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A0L9TI85|A0A0L9TI85_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0703000 LjG1.1_chr1 127124902 127133412 +
2 domain predictions
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LotjaGi1g1v0703000.4
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0703000 LjG1.1_chr1 127124902 127133412 +
2 domain predictions
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LotjaGi1g1v0703200.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0703200 LjG1.1_chr1 127145827 127154829 +
2 domain predictions
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LotjaGi1g1v0704700.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0704700 LjG1.1_chr1 127278702 127287494 -
2 domain predictions
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LotjaGi1g1v0704700.3
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0704700 LjG1.1_chr1 127278986 127287494 -
2 domain predictions
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LotjaGi1g1v0704700.4
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q9M9E1|AB40G_ARATH ABC transporter G family member 40; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0704700 LjG1.1_chr1 127278986 127287497 -
2 domain predictions
 –
LotjaGi3g1v0013300.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151SU42|A0A151SU42_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi3g1v0013300 LjG1.1_chr3 1408386 1416153 +
2 domain predictions
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LotjaGi3g1v0013300.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151SU42|A0A151SU42_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi3g1v0013300 LjG1.1_chr3 1408517 1415834 +
2 domain predictions
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LotjaGi3g1v0021000.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2168459 2184806 +
2 domain predictions
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LotjaGi3g1v0021000.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2168471 2184806 +
2 domain predictions
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LotjaGi3g1v0021000.3
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2171320 2183908 +
2 domain predictions
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LotjaGi3g1v0021000.4
n.a. ABC transporter family protein; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2171525 2183908 +
2 domain predictions
 –
LotjaGi3g1v0021000.5
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2171525 2183908 +
2 domain predictions
 –
LotjaGi3g1v0360600.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|I1KH54|I1KH54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0360600 LjG1.1_chr3 74328414 74337101 +
2 domain predictions
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LotjaGi3g1v0360600.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.2 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151SGP6|A0A151SGP6_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi3g1v0360600 LjG1.1_chr3 74330826 74336690 +
2 domain predictions
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LotjaGi3g1v0360700.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A0A1H9X9|A0A0A1H9X9_LOTJA ATP binding cassette transporter; Found in the gene: LotjaGi3g1v0360700 LjG1.1_chr3 74339767 74348081 +
2 domain predictions
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LotjaGi3g1v0360700.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A0A1H9X9|A0A0A1H9X9_LOTJA ATP binding cassette transporter; Found in the gene: LotjaGi3g1v0360700 LjG1.1_chr3 74340466 74347048 +
2 domain predictions
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LotjaGi3g1v0370900.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|G7LGN0|G7LGN0_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi3g1v0370900 LjG1.1_chr3 76062965 76072738 +
2 domain predictions
 –
LotjaGi3g1v0370900.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|G7LGN0|G7LGN0_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi3g1v0370900 LjG1.1_chr3 76063700 76072215 +
2 domain predictions
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LotjaGi3g1v0370900.3
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|G7LGN0|G7LGN0_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi3g1v0370900 LjG1.1_chr3 76063700 76072215 +
2 domain predictions
 –
LotjaGi3g1v0370900.4
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|G7LGN0|G7LGN0_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi3g1v0370900 LjG1.1_chr3 76063843 76072215 +
2 domain predictions
 –