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Lj3g3v2316620.1

Overview

Field Value
Gene ID Lj3g3v2316620
Transcript ID Lj3g3v2316620.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: elongation factor 2-like [Glycine max] gi|356556977|ref|XP_003546795.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23115
2 220 219 6.00E-282 –
Gene3D
G3DSA:3.40.50.300
2 220 219 2.40E-67
IPR027417
PANTHER
PTHR23115:SF136
2 220 219 6.00E-282 –
SUPERFAMILY
SSF52540
4 341 338 4.29E-108
IPR027417
Pfam
PF00009
17 342 326 4.30E-65 –
ProSiteProfiles
PS51722
17 344 328 53.547
IPR000795
TIGRFAM
TIGR00231
20 176 157 3.50E-17
IPR005225
CDD
cd01885
20 230 211 1.63E-125 –
PRINTS
PR00315
21 34 14 3.90E-15
IPR000795
ProSitePatterns
PS00301
58 73 16 –
IPR031157
PRINTS
PR00315
65 73 9 3.90E-15
IPR000795
PRINTS
PR00315
101 111 11 3.90E-15
IPR000795
PRINTS
PR00315
117 128 12 3.90E-15
IPR000795
PRINTS
PR00315
153 162 10 3.90E-15
IPR000795
Gene3D
G3DSA:3.90.1430.10
222 326 105 8.60E-39 –
PANTHER
PTHR23115:SF136
243 249 7 6.00E-282 –
PANTHER
PTHR23115
243 249 7 6.00E-282 –
PANTHER
PTHR23115
331 343 13 6.00E-282 –
PANTHER
PTHR23115:SF136
331 343 13 6.00E-282 –
Gene3D
G3DSA:2.40.30.10
338 484 147 1.50E-54 –
SUPERFAMILY
SSF50447
342 476 135 2.12E-41
IPR009000
PANTHER
PTHR23115:SF136
369 503 135 6.00E-282 –
PANTHER
PTHR23115
369 503 135 6.00E-282 –
CDD
cd03700
376 468 93 4.40E-41 –
Pfam
PF03144
393 468 76 6.10E-13
IPR004161

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj3g3v2316620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2316620.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.