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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2351110 |
| Transcript ID | Lj3g3v2351110.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Autoinhibited calcium ATPase [Theobroma cacao] gi|508713931|gb|EOY05828.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 47 | 47 | 3.14E-06 | – | |
| Gene3D | 1 | 50 | 50 | 1.20E-157 | ||
| Phobius | 1 | 68 | 68 | – | – | |
| PANTHER | 1 | 619 | 619 | 0 | – | |
| TIGRFAM | 1 | 728 | 728 | 3.10E-238 | ||
| PANTHER | 1 | 619 | 619 | 0 | – | |
| Pfam | 2 | 166 | 165 | 1.20E-25 | ||
| SUPERFAMILY | 49 | 169 | 121 | 9.81E-87 | – | |
| TMHMM | 69 | 91 | 23 | – | – | |
| Phobius | 69 | 89 | 21 | – | – | |
| Phobius | 90 | 124 | 35 | – | – | |
| TIGRFAM | 118 | 196 | 79 | 1.40E-20 | ||
| TMHMM | 125 | 147 | 23 | – | – | |
| Phobius | 125 | 148 | 24 | – | – | |
| Phobius | 149 | 547 | 399 | – | – | |
| Gene3D | 165 | 384 | 220 | 6.50E-45 | ||
| Pfam | 172 | 497 | 326 | 2.30E-19 | – | |
| SUPERFAMILY | 173 | 193 | 21 | 1.15E-59 | ||
| PRINTS | 175 | 189 | 15 | 3.70E-31 | – | |
| ProSitePatterns | 177 | 183 | 7 | – | ||
| SUPERFAMILY | 182 | 381 | 200 | 8.50E-33 | ||
| SUPERFAMILY | 329 | 588 | 260 | 1.15E-59 | ||
| PRINTS | 332 | 350 | 19 | 1.20E-12 | ||
| PRINTS | 377 | 388 | 12 | 3.70E-31 | – | |
| PRINTS | 399 | 409 | 11 | 3.70E-31 | – | |
| TIGRFAM | 455 | 564 | 110 | 1.40E-33 | ||
| Gene3D | 462 | 727 | 266 | 1.20E-157 | ||
| PRINTS | 483 | 499 | 17 | 1.20E-12 | ||
| PRINTS | 483 | 502 | 20 | 3.70E-31 | – | |
| PRINTS | 507 | 519 | 13 | 3.70E-31 | – | |
| PRINTS | 515 | 540 | 26 | 1.20E-12 | ||
| SUPERFAMILY | 533 | 728 | 196 | 9.81E-87 | – | |
| TMHMM | 543 | 565 | 23 | – | – | |
| Phobius | 548 | 566 | 19 | – | – | |
| Phobius | 567 | 571 | 5 | – | – | |
| Pfam | 568 | 726 | 159 | 1.00E-39 | ||
| TMHMM | 570 | 592 | 23 | – | – | |
| Phobius | 572 | 592 | 21 | – | – | |
| Phobius | 593 | 672 | 80 | – | – | |
| PANTHER | 635 | 733 | 99 | 0 | – | |
| PANTHER | 635 | 733 | 99 | 0 | – | |
| TMHMM | 667 | 689 | 23 | – | – | |
| Phobius | 673 | 691 | 19 | – | – | |
| Phobius | 692 | 702 | 11 | – | – | |
| Phobius | 703 | 723 | 21 | – | – | |
| TMHMM | 704 | 726 | 23 | – | – | |
| Phobius | 724 | 743 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Calcium-transporting ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Calcium ion transmembrane transport | A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj3g3v2351110.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2351110.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.