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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2693100 |
| Transcript ID | Lj3g3v2693100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: beta-galactosidase 1-like [Glycine max] gi|356526021|ref|XP_003531618.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 550 | 550 | 0 | – | |
| PANTHER | 1 | 550 | 550 | 0 | ||
| Phobius | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| ProSiteProfiles | 1 | 18 | 18 | 6 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 10 | 21 | 12 | – | – | |
| Phobius | 22 | 26 | 5 | – | – | |
| Gene3D | 26 | 344 | 319 | 3.40E-128 | ||
| Phobius | 27 | 566 | 540 | – | – | |
| SUPERFAMILY | 28 | 344 | 317 | 4.61E-107 | ||
| Pfam | 35 | 339 | 305 | 1.80E-117 | ||
| PRINTS | 38 | 55 | 18 | 1.30E-69 | ||
| PRINTS | 59 | 77 | 19 | 1.30E-69 | ||
| PRINTS | 114 | 133 | 20 | 1.30E-69 | ||
| PRINTS | 171 | 186 | 16 | 1.30E-69 | ||
| ProSitePatterns | 173 | 185 | 13 | – | ||
| PRINTS | 250 | 265 | 16 | 1.30E-69 | ||
| PRINTS | 287 | 302 | 16 | 1.30E-69 | ||
| PRINTS | 307 | 323 | 17 | 1.30E-69 | ||
| SUPERFAMILY | 402 | 543 | 142 | 3.54E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj3g3v2693100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2693100.4, powered by CORGI.
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