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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2849010 |
| Transcript ID | Lj3g3v2849010.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Cicer arietinum] gi|502082429|ref|XP_004487164.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 63 | 63 | – | – | |
| MobiDBLite | 77 | 143 | 67 | – | – | |
| PANTHER | 142 | 628 | 487 | 0 | – | |
| PANTHER | 142 | 628 | 487 | 0 | – | |
| Gene3D | 154 | 242 | 89 | 3.80E-21 | ||
| SUPERFAMILY | 155 | 236 | 82 | 5.20E-25 | ||
| ProSiteProfiles | 155 | 242 | 88 | 15.223 | ||
| SMART | 155 | 188 | 34 | 12 | ||
| ProSiteProfiles | 155 | 188 | 34 | 9.44 | ||
| Pfam | 164 | 221 | 58 | 5.70E-07 | – | |
| SMART | 189 | 222 | 34 | 0.22 | ||
| ProSiteProfiles | 189 | 222 | 34 | 5.281 | ||
| Gene3D | 276 | 383 | 108 | 3.50E-05 | ||
| SUPERFAMILY | 278 | 382 | 105 | 5.20E-25 | ||
| SMART | 347 | 380 | 34 | 90 | ||
| ProSiteProfiles | 393 | 494 | 102 | 13.101 | ||
| ProSiteProfiles | 393 | 426 | 34 | 5.251 | ||
| SMART | 393 | 426 | 34 | 31 | ||
| Gene3D | 394 | 510 | 117 | 1.10E-26 | ||
| SMART | 427 | 460 | 34 | 1.10E-05 | ||
| ProSiteProfiles | 427 | 460 | 34 | 6.579 | ||
| SUPERFAMILY | 436 | 623 | 188 | 4.03E-22 | ||
| SMART | 461 | 494 | 34 | 47 | ||
| Gene3D | 519 | 619 | 101 | 5.00E-19 | ||
| Pfam | 530 | 619 | 90 | 6.50E-12 | ||
| CDD | 533 | 621 | 89 | 6.93E-20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of Lj3g3v2849010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2849010.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.