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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2888220 |
| Transcript ID | Lj3g3v2888220.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Outer arm dynein light chain 1 protein [Arabidopsis thaliana] gi|30679417|ref|NP_192235.3| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 28 | 60 | 33 | – | – | |
| MobiDBLite | 118 | 144 | 27 | – | – | |
| MobiDBLite | 162 | 272 | 111 | – | – | |
| PANTHER | 259 | 355 | 97 | 7.10E-81 | – | |
| PANTHER | 259 | 355 | 97 | 7.10E-81 | – | |
| PANTHER | 374 | 568 | 195 | 7.10E-81 | – | |
| PANTHER | 374 | 568 | 195 | 7.10E-81 | – | |
| Gene3D | 397 | 573 | 177 | 8.60E-39 | ||
| SUPERFAMILY | 405 | 564 | 160 | 1.96E-30 | – | |
| SMART | 411 | 438 | 28 | 0.73 | – | |
| SMART | 411 | 434 | 24 | 27 | ||
| ProSiteProfiles | 413 | 434 | 22 | 6.31 | ||
| SMART | 433 | 454 | 22 | 140 | – | |
| Pfam | 434 | 491 | 58 | 4.40E-09 | ||
| ProSiteProfiles | 435 | 456 | 22 | 9.699 | ||
| SMART | 455 | 477 | 23 | 23 | – | |
| SMART | 455 | 478 | 24 | 0.55 | ||
| SMART | 455 | 477 | 23 | 23 | – | |
| ProSiteProfiles | 457 | 479 | 23 | 7.412 | ||
| SMART | 478 | 499 | 22 | 20 | – | |
| SMART | 478 | 507 | 30 | 67 | – | |
| ProSiteProfiles | 480 | 501 | 22 | 8.497 | ||
| SMART | 500 | 524 | 25 | 81 | – | |
| SMART | 500 | 522 | 23 | 160 | ||
| ProSiteProfiles | 502 | 523 | 22 | 6.503 | ||
| ProSiteProfiles | 528 | 549 | 22 | 4.747 | ||
| MobiDBLite | 592 | 647 | 56 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v2888220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2888220.1, powered by CORGI.
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