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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2888320 |
| Transcript ID | Lj3g3v2888320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolasegi|2559006|gb|AAD04188.1| beta-amylase [Medicago sativa] gi|3913031|sp|O22585.1|AMYB_MEDSA |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 494 | 494 | 0 | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| PANTHER | 1 | 494 | 494 | 0 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| SUPERFAMILY | 9 | 491 | 483 | 3.76E-200 | ||
| Gene3D | 9 | 447 | 439 | 1.20E-217 | ||
| Phobius | 12 | 30 | 19 | – | – | |
| Pfam | 16 | 438 | 423 | 3.20E-122 | ||
| Phobius | 31 | 496 | 466 | – | – | |
| PRINTS | 47 | 61 | 15 | 1.10E-97 | ||
| PRINTS | 68 | 86 | 19 | 1.10E-97 | ||
| PRINTS | 90 | 111 | 22 | 1.10E-97 | ||
| ProSitePatterns | 94 | 102 | 9 | – | ||
| PRINTS | 173 | 182 | 10 | 2.70E-41 | ||
| ProSitePatterns | 183 | 193 | 11 | – | ||
| PRINTS | 183 | 205 | 23 | 1.10E-97 | ||
| PRINTS | 255 | 274 | 20 | 1.10E-97 | ||
| PRINTS | 291 | 307 | 17 | 1.10E-97 | ||
| PRINTS | 308 | 319 | 12 | 1.10E-97 | ||
| PRINTS | 326 | 349 | 24 | 1.10E-97 | ||
| PRINTS | 329 | 339 | 11 | 2.70E-41 | ||
| PRINTS | 363 | 385 | 23 | 1.10E-97 | ||
| PRINTS | 371 | 380 | 10 | 2.70E-41 | ||
| PRINTS | 385 | 394 | 10 | 2.70E-41 | ||
| PRINTS | 400 | 416 | 17 | 2.70E-41 | ||
| PRINTS | 418 | 432 | 15 | 2.70E-41 | ||
| PRINTS | 433 | 447 | 15 | 2.70E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Polysaccharide catabolic process | The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. | ||
| Molecular function | Beta-amylase activity | Catalysis of the reaction: (1,4-alpha-D-glucosyl)(n+1) + H2O = (1,4-alpha-D-glucosyl)(n-1) + alpha-maltose. This reaction is the hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains. |
Expression pattern of Lj3g3v2888320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2888320.1, powered by CORGI.
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