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Lj3g3v2995640.1

Overview

Field Value
Gene ID Lj3g3v2995640
Transcript ID Lj3g3v2995640.1
Lotus japonicus genome version MG20 v3.0
Description RecName: Full=Putative poly [ADP]-ribose] gi|118573101|sp|Q1SGF1.1|PARP3_MEDTR
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 44 44 – –
PANTHER
PTHR10459:SF54
11 212 202 0 –
PANTHER
PTHR10459
11 212 202 0 –
ProSiteProfiles
PS50800
60 94 35 8.828
IPR003034
SMART
SM01335
86 139 54 1.10E-24
IPR012982
Pfam
PF08063
88 138 51 9.30E-20
IPR012982
Gene3D
G3DSA:3.40.50.10190
148 211 64 1.80E-06
IPR001357
SUPERFAMILY
SSF52113
150 225 76 2.62E-08
IPR001357
ProSiteProfiles
PS50172
162 213 52 10.057
IPR001357
CDD
cd00027
162 201 40 0.00145434
IPR001357
PANTHER
PTHR10459
231 699 469 0 –
PANTHER
PTHR10459:SF54
231 699 469 0 –
SUPERFAMILY
SSF142921
237 329 93 2.88E-13
IPR008893
SMART
SM00773
239 318 80 7.20E-08
IPR008893
Pfam
PF05406
257 313 57 3.30E-06
IPR008893
Gene3D
G3DSA:1.20.142.10
319 488 170 6.00E-22
IPR004102
SUPERFAMILY
SSF47587
351 486 136 1.83E-29
IPR004102
ProSiteProfiles
PS51060
351 470 120 20.607
IPR004102
CDD
cd01437
351 697 347 2.37E-105 –
Pfam
PF02877
352 485 134 7.70E-20
IPR004102
ProSiteProfiles
PS51059
479 705 227 58.322
IPR012317
Pfam
PF00644
488 697 210 1.10E-42
IPR012317
SUPERFAMILY
SSF56399
488 700 213 1.73E-41 –
Gene3D
G3DSA:3.90.228.10
490 699 210 3.00E-38
IPR012317

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003950
Molecular function NAD+ ADP-ribosyltransferase activity Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.
Subterm of
GO:0006471
Biological process Protein ADP-ribosylation The transfer, from NAD, of ADP-ribose to protein amino acids.
Subterm of

Genome browser

LORE1 insertions 31

Expression data

Expression pattern

Expression pattern of Lj3g3v2995640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2995640.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.