Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF00644

Source: Pfam

Description

Poly(ADP-ribose) polymerase catalytic domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003950 View details of GO:0003950 AmiGO InterPro QuickGO	Molecular function	NAD+ ADP-ribosyltransferase activity	Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.	Subterm of GO:0016763

Associated Lotus transcripts 16

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0082689.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RecName: Full=Putative poly [ADP]-ribose] gi\|118573101\|sp\|Q1SGF1.1\|PARP3_MEDTR	Domains Coil G3DSA:1.20.142.10 G3DSA:3.90.228.10 IPR004102 IPR012317 PF00644 PF02877 PS51059 PS51060 PTHR10459 PTHR10459:SF54 SSF47587 SSF56399 cd01437	14
Lj0g3v0345469.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: poly [ADP]-ribose] gi\|502109943\|ref\|XP_004493762.1\|	Domains G3DSA:3.90.228.10 IPR012317 PF00644 PS51059 PTHR10459 PTHR10459:SF60 SSF56399 cd01437	8
Lj1g3v4483410.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: poly [ADP]-ribose] gi\|502109943\|ref\|XP_004493762.1\|	Domains G3DSA:1.20.142.10 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR004102 IPR008893 IPR012317 IPR012982 PF00533 PF00644 PF02877 PF05406 PF08063 PS50172 PS51059 PS51060 PTHR10459 PTHR10459:SF60 SM00292 SM00773 SM01335 SSF142921 SSF47587 SSF52113 SSF56399 cd00027 cd01437 cd08001 mobidb-lite	29
Lj2g3v1452870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: inactive poly [ADP]-ribose] gi\|502092735\|ref\|XP_004489757.1\|	Domains G3DSA:3.90.228.10 IPR004170 IPR012317 IPR022003 PF00644 PF12174 PS50918 PS51059 PTHR32263 PTHR32263:SF4 SSF56399 mobidb-lite	12
Lj2g3v1510660.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: poly [ADP]-ribose] gi\|502109943\|ref\|XP_004493762.1\|	Domains G3DSA:1.20.142.10 G3DSA:3.30.1740.10 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR001510 IPR004102 IPR008288 IPR008893 IPR012317 IPR012982 PF00533 PF00644 PF00645 PF02877 PF05406 PF08063 PIRSF000489 PS50064 PS50172 PS51059 PS51060 PTHR10459 PTHR10459:SF60 SM00292 SM00773 SM01335 SM01336 SSF142921 SSF47587 SSF52113 SSF56399 SSF57716 cd00027 cd01437 cd08001 mobidb-lite	37
Lj3g3v2995640.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RecName: Full=Putative poly [ADP]-ribose] gi\|118573101\|sp\|Q1SGF1.1\|PARP3_MEDTR	Domains G3DSA:1.20.142.10 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR003034 IPR004102 IPR008893 IPR012317 IPR012982 PF00644 PF02877 PF05406 PF08063 PS50172 PS50800 PS51059 PS51060 PTHR10459 PTHR10459:SF54 SM00773 SM01335 SSF142921 SSF47587 SSF52113 SSF56399 cd00027 cd01437 mobidb-lite	28
Lj5g3v1615790.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: poly [ADP]-ribose] gi\|502117782\|ref\|XP_004495943.1\|	Domains Coil G3DSA:1.10.720.30 G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:3.90.228.10 IPR003034 IPR004102 IPR008893 IPR012317 PF00644 PF02037 PF02877 PF05406 PS50800 PS51059 PS51060 PTHR10459 PTHR10459:SF59 SM00513 SM00773 SSF142921 SSF47587 SSF56399 SSF68906 cd01437 cd08002 mobidb-lite	27
LotjaGi1g1v0711100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp\|Q9ZP54\|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr\|A0A072U2F3\|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100	Domains G3DSA:1.10.20.130 G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:2.20.25.630 G3DSA:3.30.1740.10 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR001510 IPR004102 IPR008288 IPR008893 IPR012317 IPR012982 IPR036420 IPR036616 IPR036930 IPR036957 IPR038650 PF00533 PF00644 PF00645 PF02877 PF05406 PF08063 PIRSF000489 PS00347 PS50064 PS50172 PS51059 PS51060 PTHR10459 PTHR10459:SF80 SM00292 SM00773 SM01335 SM01336 SSF142921 SSF47587 SSF52113 SSF56399 SSF57716 cd01437 cd08001 cd17747 mobidb-lite	46
LotjaGi1g1v0711100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp\|Q9ZP54\|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr\|A0A072U2F3\|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100	Domains G3DSA:1.10.20.130 G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:2.20.25.630 G3DSA:3.30.1740.10 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR001510 IPR004102 IPR008288 IPR008893 IPR012317 IPR012982 IPR036420 IPR036616 IPR036930 IPR036957 IPR038650 PF00533 PF00644 PF00645 PF02877 PF05406 PF08063 PIRSF000489 PS50064 PS50172 PS51059 PS51060 PTHR10459 PTHR10459:SF80 SM00292 SM00773 SM01335 SM01336 SSF142921 SSF47587 SSF52113 SSF56399 SSF57716 cd01437 cd08001 cd17747 mobidb-lite	45
LotjaGi1g1v0711100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp\|Q9ZP54\|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr\|A0A072U2F3\|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100	Domains G3DSA:1.10.20.130 G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:2.20.25.630 G3DSA:3.30.1740.10 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR001510 IPR004102 IPR008288 IPR008893 IPR012317 IPR012982 IPR036420 IPR036616 IPR036930 IPR036957 IPR038650 PF00533 PF00644 PF00645 PF02877 PF05406 PF08063 PIRSF000489 PS50064 PS50172 PS51059 PS51060 PTHR10459 PTHR10459:SF80 SM00292 SM00773 SM01335 SM01336 SSF142921 SSF47587 SSF52113 SSF56399 SSF57716 cd01437 cd08001 cd17747 mobidb-lite	45
LotjaGi2g1v0327000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT1G32230.2 WWE protein-protein interaction domain protein family; Swiss-Prot: sp\|Q8RY59\|RCD1_ARATH Inactive poly [ADP]-ribose] polymerase RCD1; TrEMBL-Plants: tr\|A0A072VQR8\|A0A072VQR8_MEDTR Inactive poly [ADP]-ribose] polymerase RCD1; Found in the gene: LotjaGi2g1v0327000	Domains G3DSA:3.90.228.10 IPR004170 IPR012317 IPR022003 PF00644 PF12174 PS50918 PS51059 PS51879 PTHR32263 PTHR32263:SF5 SSF56399 mobidb-lite	13
LotjaGi2g1v0337700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp\|Q9ZP54\|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr\|A0A072U2F3\|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi2g1v0337700	Domains G3DSA:1.10.20.130 G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:2.20.25.630 G3DSA:3.30.1740.10 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR001510 IPR004102 IPR008288 IPR008893 IPR012317 IPR012982 IPR036420 IPR036616 IPR036930 IPR036957 IPR038650 PF00533 PF00644 PF00645 PF02877 PF05406 PF08063 PIRSF000489 PS50064 PS50172 PS51059 PS51060 PTHR10459 PTHR10459:SF80 SM00292 SM00773 SM01335 SM01336 SSF142921 SSF47587 SSF52113 SSF56399 SSF57716 cd01437 cd08001 cd17747 mobidb-lite	45
LotjaGi3g1v0478100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp\|Q9SWB4\|PARP3_SOYBN Poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr\|G7JIG7\|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100	Domains Coil G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:2.20.25.630 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR003034 IPR004102 IPR008893 IPR012317 IPR012982 IPR036420 IPR036616 IPR036930 IPR038650 PF00533 PF00644 PF02877 PF05406 PF08063 PS50172 PS50800 PS51059 PS51060 PTHR10459 PTHR10459:SF106 SM00292 SM00773 SM01335 SSF142921 SSF47587 SSF52113 SSF56399 cd01437 cd08001 cd17747 mobidb-lite	38
LotjaGi3g1v0478100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp\|Q9SWB4\|PARP3_SOYBN Poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr\|G7JIG7\|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100	Domains Coil G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:2.20.25.630 G3DSA:3.40.50.10190 G3DSA:3.90.228.10 IPR001357 IPR004102 IPR008893 IPR012317 IPR012982 IPR036420 IPR036616 IPR036930 IPR038650 PF00644 PF02877 PF05406 PF08063 PS50172 PS51059 PS51060 PTHR10459 PTHR10459:SF106 SM00292 SM00773 SM01335 SSF142921 SSF47587 SSF52113 SSF56399 cd01437 cd08001 cd17747	34
LotjaGi3g1v0478100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp\|Q1SGF1\|PARP3_MEDTR Putative poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr\|G7JIG7\|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100	Domains Coil G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:3.90.228.10 IPR004102 IPR008893 IPR012317 IPR036616 IPR036930 PF00644 PF02877 PF05406 PS51059 PS51060 PTHR10459 PTHR10459:SF106 SM00773 SSF142921 SSF47587 SSF56399 cd01437	21
LotjaGi5g1v0249900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Poly [ADP]-ribose] polymerase; TAIR: AT4G02390.2 poly(ADP-ribose) polymerase; Swiss-Prot: sp\|O50017\|PARP2_MAIZE Poly [ADP]-ribose] polymerase 2; TrEMBL-Plants: tr\|A0A151U4Q3\|A0A151U4Q3_CAJCA Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi5g1v0249900	Domains Coil G3DSA:1.10.720.30 G3DSA:1.20.142.10 G3DSA:2.20.140.10 G3DSA:3.90.228.10 IPR003034 IPR004102 IPR008893 IPR012317 IPR036361 IPR036616 IPR036930 PF00644 PF02037 PF02877 PF05406 PS50800 PS51059 PS51060 PTHR10459 PTHR10459:SF60 SM00513 SM00773 SSF142921 SSF47587 SSF56399 SSF68906 cd01437 cd08002 mobidb-lite	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	6.25