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IPR008893 is a WGR domain.
<p>This domain is named after the most conserved central motif of the domain. It is found in a variety of polyA polymerases as well as the Escherichia coli molybdate metabolism regulator [swissprot:P33345] and other proteins of unknown function. The domain is found in isolation in proteins such as [swissprot:Q9JN21] and is between 70 and 90 residues in length. This domain participates in binding DNA near the 5' terminus and mediates domain-domain contacts essential for DNA-dependent activity [[cite:PUB00100920], [cite:PUB00075212], [cite:PUB00100921]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: poly [ADP]-ribose] gi|502109943|ref|XP_004493762.1| | 29 | ||
| – | PREDICTED: poly [ADP]-ribose] gi|502109943|ref|XP_004493762.1| | 37 | ||
| – | RecName: Full=Putative poly [ADP]-ribose] gi|118573101|sp|Q1SGF1.1|PARP3_MEDTR | 28 | ||
| – | PREDICTED: poly [ADP]-ribose] gi|502117782|ref|XP_004495943.1| | 27 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100 | 46 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100 | 45 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100 | 45 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi2g1v0337700 | 45 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi2g1v0337700 | 40 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp|Q9SWB4|PARP3_SOYBN Poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr|G7JIG7|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100 | 38 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp|Q9SWB4|PARP3_SOYBN Poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr|G7JIG7|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100 | 34 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp|Q1SGF1|PARP3_MEDTR Putative poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr|G7JIG7|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100 | 21 | ||
| – | Poly [ADP]-ribose] polymerase; TAIR: AT4G02390.2 poly(ADP-ribose) polymerase; Swiss-Prot: sp|O50017|PARP2_MAIZE Poly [ADP]-ribose] polymerase 2; TrEMBL-Plants: tr|A0A151U4Q3|A0A151U4Q3_CAJCA Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi5g1v0249900 | 30 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 7.69 |