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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3032100 |
| Transcript ID | Lj3g3v3032100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Glycine max] gi|356497127|ref|XP_003517414.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 98 | 96 | 1.10E-70 | ||
| PANTHER | 3 | 151 | 149 | 0 | – | |
| PANTHER | 3 | 151 | 149 | 0 | – | |
| TIGRFAM | 6 | 889 | 884 | 4.20E-240 | ||
| SUPERFAMILY | 13 | 94 | 82 | 2.23E-69 | – | |
| Pfam | 24 | 590 | 567 | 5.20E-32 | ||
| Gene3D | 114 | 365 | 252 | 1.80E-45 | ||
| SUPERFAMILY | 118 | 246 | 129 | 3.75E-29 | ||
| PANTHER | 179 | 281 | 103 | 0 | – | |
| PANTHER | 179 | 281 | 103 | 0 | – | |
| Coils | 286 | 306 | 21 | – | – | |
| SUPERFAMILY | 313 | 352 | 40 | 3.75E-29 | ||
| PANTHER | 323 | 873 | 551 | 0 | – | |
| PANTHER | 323 | 873 | 551 | 0 | – | |
| SUPERFAMILY | 352 | 597 | 246 | 2.23E-69 | – | |
| CDD | 365 | 593 | 229 | 7.11E-67 | – | |
| Gene3D | 366 | 581 | 216 | 1.10E-70 | ||
| Gene3D | 582 | 728 | 147 | 1.00E-17 | ||
| CDD | 591 | 711 | 121 | 2.75E-40 | – | |
| SUPERFAMILY | 624 | 760 | 137 | 5.76E-20 | ||
| Pfam | 630 | 752 | 123 | 1.50E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Aminoacyl-tRNA editing activity | The hydrolysis of an incorrectly aminoacylated tRNA. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Leucine-tRNA ligase activity | Catalysis of the reaction: L-leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H(+) + Leu-tRNA(Leu). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
| Biological process | Leucyl-tRNA aminoacylation | The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. The leucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a leucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification. |
Expression pattern of Lj3g3v3032100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3032100.3, powered by CORGI.
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