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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3069010 |
| Transcript ID | Lj3g3v3069010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | membrane transporter [Lotus japonicus] gi|13539545|emb|CAC35729.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 262 | 262 | 4.60E-160 | – | |
| PANTHER | 1 | 262 | 262 | 4.60E-160 | – | |
| Phobius | 1 | 55 | 55 | – | – | |
| SUPERFAMILY | 46 | 241 | 196 | 2.35E-28 | ||
| Gene3D | 51 | 239 | 189 | 6.00E-25 | – | |
| ProSiteProfiles | 53 | 291 | 239 | 9.91 | ||
| Phobius | 56 | 77 | 22 | – | – | |
| CDD | 56 | 234 | 179 | 4.07E-10 | ||
| TMHMM | 56 | 78 | 23 | – | – | |
| Pfam | 58 | 248 | 191 | 1.00E-13 | ||
| Phobius | 78 | 88 | 11 | – | – | |
| Phobius | 89 | 110 | 22 | – | – | |
| Phobius | 111 | 115 | 5 | – | – | |
| TMHMM | 114 | 136 | 23 | – | – | |
| Phobius | 116 | 137 | 22 | – | – | |
| Phobius | 138 | 143 | 6 | – | – | |
| TMHMM | 143 | 165 | 23 | – | – | |
| Phobius | 144 | 164 | 21 | – | – | |
| Phobius | 165 | 183 | 19 | – | – | |
| TMHMM | 180 | 202 | 23 | – | – | |
| Phobius | 184 | 202 | 19 | – | – | |
| Phobius | 203 | 213 | 11 | – | – | |
| Phobius | 214 | 236 | 23 | – | – | |
| TMHMM | 215 | 234 | 20 | – | – | |
| Phobius | 237 | 255 | 19 | – | – | |
| Phobius | 256 | 273 | 18 | – | – | |
| Phobius | 274 | 291 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3069010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3069010.1, powered by CORGI.
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