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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3069020 |
| Transcript ID | Lj3g3v3069020.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | membrane transporter [Lotus japonicus] gi|13539545|emb|CAC35729.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 66 | 66 | – | – | |
| PANTHER | 1 | 306 | 306 | 3.30E-189 | – | |
| PANTHER | 1 | 306 | 306 | 3.30E-189 | – | |
| SUPERFAMILY | 60 | 308 | 249 | 3.79E-31 | ||
| ProSiteProfiles | 64 | 311 | 248 | 9.442 | ||
| Gene3D | 64 | 250 | 187 | 4.40E-22 | – | |
| CDD | 67 | 245 | 179 | 3.23E-09 | ||
| TMHMM | 67 | 89 | 23 | – | – | |
| Phobius | 67 | 88 | 22 | – | – | |
| Pfam | 69 | 294 | 226 | 1.40E-14 | ||
| Phobius | 89 | 99 | 11 | – | – | |
| Phobius | 100 | 121 | 22 | – | – | |
| Phobius | 122 | 126 | 5 | – | – | |
| TMHMM | 125 | 147 | 23 | – | – | |
| Phobius | 127 | 148 | 22 | – | – | |
| Phobius | 149 | 154 | 6 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 155 | 175 | 21 | – | – | |
| Phobius | 176 | 194 | 19 | – | – | |
| TMHMM | 191 | 213 | 23 | – | – | |
| Phobius | 195 | 213 | 19 | – | – | |
| Phobius | 214 | 224 | 11 | – | – | |
| Phobius | 225 | 245 | 21 | – | – | |
| TMHMM | 226 | 245 | 20 | – | – | |
| Phobius | 246 | 270 | 25 | – | – | |
| Phobius | 271 | 290 | 20 | – | – | |
| TMHMM | 271 | 293 | 23 | – | – | |
| Phobius | 291 | 311 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3069020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3069020.1, powered by CORGI.
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