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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3189740 |
| Transcript ID | Lj3g3v3189740.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | XB3 in [Theobroma cacao] gi|508786803|gb|EOY34059.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 448 | 448 | 1.30E-300 | – | |
| PANTHER | 1 | 448 | 448 | 1.30E-300 | – | |
| SMART | 10 | 40 | 31 | 2100 | ||
| ProSiteProfiles | 10 | 247 | 238 | 43.503 | ||
| SUPERFAMILY | 15 | 247 | 233 | 7.47E-48 | ||
| Pfam | 15 | 108 | 94 | 6.70E-13 | ||
| Gene3D | 15 | 124 | 110 | 1.10E-25 | ||
| CDD | 44 | 178 | 135 | 4.26E-32 | – | |
| SMART | 45 | 74 | 30 | 0.0025 | ||
| ProSiteProfiles | 45 | 77 | 33 | 11.007 | ||
| SMART | 78 | 107 | 30 | 5.30E-04 | ||
| ProSiteProfiles | 78 | 110 | 33 | 10.686 | ||
| SMART | 112 | 142 | 31 | 0.013 | ||
| CDD | 112 | 247 | 136 | 1.07E-26 | – | |
| Pfam | 112 | 134 | 23 | 0.027 | ||
| Gene3D | 125 | 172 | 48 | 5.40E-11 | ||
| SMART | 157 | 186 | 30 | 0.0098 | ||
| ProSiteProfiles | 157 | 189 | 33 | 10.927 | ||
| Pfam | 158 | 182 | 25 | 5.30E-04 | ||
| Gene3D | 173 | 247 | 75 | 1.10E-17 | ||
| SMART | 194 | 223 | 30 | 0.13 | ||
| ProSiteProfiles | 194 | 226 | 33 | 12.422 | ||
| Pfam | 195 | 235 | 41 | 1.40E-07 | – | |
| Gene3D | 307 | 374 | 68 | 1.50E-05 | ||
| SUPERFAMILY | 313 | 373 | 61 | 4.35E-05 | – | |
| ProSiteProfiles | 320 | 369 | 50 | 9.052 | ||
| CDD | 320 | 372 | 53 | 0.00337289 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v3189740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3189740.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.