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Field | Value |
---|---|
Gene ID | Lj3g3v3237910 |
Transcript ID | Lj3g3v3237910.1 |
Lotus japonicus genome version | MG20 v3.0 |
Description | Trafficking protein particle complex subunit [Medicago truncatula] gi|357521045|ref|XP_003630811.1| |
Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 141 | 141 | 4.20E-76 | – | |
PANTHER | 1 | 141 | 141 | 4.20E-76 | ||
SUPERFAMILY | 1 | 133 | 133 | 2.20E-39 | ||
Gene3D | 2 | 133 | 132 | 2.50E-40 | – | |
SMART | 4 | 134 | 131 | 6.50E-69 | ||
Pfam | 4 | 133 | 130 | 7.10E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
Cellular component | TRAPP complex | A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active. |
Expression pattern of Lj3g3v3237910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3237910.1, powered by CORGI.
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