Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:0030008

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description TRAPP complex
Full defintion A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active.
Subterm of

Relationships

The relationship of GO:0030008 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0030008, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

  • Drag and drop nodes to manually position (i.e. fix) them
  • Double click on a node to unfix the node
  • Press Alt and double click to visit the page containing further details of a GO term
  • Right clicking on a node will reveal a context menu

Controls

Force layout

Every force layout is different—we have picked a set of parameters which suits most GO ancestor tree chart well. If you mess something up—don't worry: hitting the "reset view" button above will reset the chart to its default layout.

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCvw
PMID
A trapper keeper for TRAPP, its structures and functions.Yu S, Liang Y
Cell Mol Life Sci. 2012 Dec; 69 (23): 3933–44.PMID: 22669257

During biosynthesis many membrane and secreted proteins are transported from the endoplasmic reticulum, through the Golgi and on to the plasma membrane in small transport vesicles. These transport vesicles have to undergo budding, movement, tethering, docking, and fusion at each organelle of the biosynthetic pathway. The transport protein particle (TRAPP) complex was initially identified as the tethering factor for endoplasmic reticulum (ER)-derived COPII vesicles, but the functions of TRAPP may extend to other areas of biology. Three forms of TRAPP complexes have been discovered to date, and recent advances in research have provided new insights on the structures and functions of TRAPP. Here we provide a comprehensive review of the recent findings in TRAPP biology.

Associated Lotus transcripts 22

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0011519.1
– Transport protein particle (TRAPP) component [Theobroma cacao] gi|508782330|gb|EOY29586.1|
GO terms
2
Lj0g3v0253839.1
– Transport protein particle (TRAPP) component [Theobroma cacao] gi|508782330|gb|EOY29586.1|
GO terms
2
Lj1g3v4037140.1
– PREDICTED: trafficking protein particle complex subunit 1-like [Cicer arietinum] gi|502180695|ref|XP_004516696.1|
GO terms
2
Lj3g3v1010920.1
– PREDICTED: trafficking protein particle complex subunit 3-like isoform X2 [Cicer arietinum] gi|502143721|ref|XP_004505441.1|
GO terms
2
Lj3g3v3237910.1
– Trafficking protein particle complex subunit [Medicago truncatula] gi|357521045|ref|XP_003630811.1|
GO terms
2
Lj6g3v0315170.1
– Trafficking protein particle complex subunit [Medicago truncatula] gi|357521045|ref|XP_003630811.1|
GO terms
2
LotjaGi1g1v0652600.1
– Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q5NCF2|TPPC1_MOUSE Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|B7FHC8|B7FHC8_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0652600
GO terms
2
LotjaGi1g1v0652600.2
– Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q557G3|TPPC1_DICDI Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|B7FHC8|B7FHC8_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0652600
GO terms
2
LotjaGi1g1v0652600.3
– Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q557G3|TPPC1_DICDI Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|A0A151TJI3|A0A151TJI3_CAJCA Trafficking protein particle complex subunit 1; Found in the gene: LotjaGi1g1v0652600
GO terms
2
LotjaGi3g1v0149700.1
– Trafficking protein particle complex subunit 3; TAIR: AT5G54750.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q5ZI57|TPPC3_CHICK Trafficking protein particle complex subunit 3; TrEMBL-Plants: tr|I3SMY8|I3SMY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0149700
GO terms
2
LotjaGi3g1v0149700.2
– Trafficking protein particle complex subunit 3; TAIR: AT5G54750.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q5ZI57|TPPC3_CHICK Trafficking protein particle complex subunit 3; TrEMBL-Plants: tr|I3SMY8|I3SMY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0149700
GO terms
2
LotjaGi3g1v0492900.1
– Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900
GO terms
2
LotjaGi3g1v0492900.2
– Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900
GO terms
2
LotjaGi3g1v0492900.3
– Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900
GO terms
2
LotjaGi6g1v0042200.1
– Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|G7L8Y7|G7L8Y7_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi6g1v0042200
GO terms
2
LotjaGi6g1v0042200.2
– Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|G7L8Y7|G7L8Y7_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi6g1v0042200
GO terms
2
LotjaGi6g1v0042200.3
– Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I1LLI8|I1LLI8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0042200
GO terms
2
LotjaGi6g1v0069700.1
– Trafficking protein particle complex subunit; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3SPD0|I3SPD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0069700
GO terms
2
LotjaGi6g1v0069700.2
– Trafficking protein particle complex subunit; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3SPD0|I3SPD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0069700
GO terms
2
LotjaGi6g1v0069700.3
– Trafficking protein particle complex subunit 5; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3SPD0|I3SPD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0069700
GO terms
2
LotjaGi6g1v0069900.1
– Trafficking protein particle complex subunit; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3S8A6|I3S8A6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0069900
GO terms
2
LotjaGi6g1v0070000.1
– Trafficking protein particle complex subunit; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3S8A6|I3S8A6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0070000
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0048193
Biological process Golgi vesicle transport 1 4.55