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IPR007233 is a Trafficking protein particle complex subunit.
<p>This entry includes a group of trafficking protein particle complex subunit (TRAPPC) proteins, such as TPPC1/4 from humans and Trs23/Bet5 from yeasts.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | TRAPP complex | A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: trafficking protein particle complex subunit 1-like [Cicer arietinum] gi|502180695|ref|XP_004516696.1| | 9 | ||
| – | Trafficking protein particle complex subunit [Medicago truncatula] gi|357521045|ref|XP_003630811.1| | 8 | ||
| – | Trafficking protein particle complex subunit [Medicago truncatula] gi|357521045|ref|XP_003630811.1| | 7 | ||
| – | Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q5NCF2|TPPC1_MOUSE Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|B7FHC8|B7FHC8_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0652600 | 10 | ||
| – | Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q557G3|TPPC1_DICDI Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|B7FHC8|B7FHC8_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0652600 | 10 | ||
| – | Trafficking protein particle complex subunit-like protein; TAIR: AT1G51160.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q557G3|TPPC1_DICDI Trafficking protein particle complex subunit 1; TrEMBL-Plants: tr|A0A151TJI3|A0A151TJI3_CAJCA Trafficking protein particle complex subunit 1; Found in the gene: LotjaGi1g1v0652600 | 9 | ||
| – | Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900 | 9 | ||
| – | Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900 | 9 | ||
| – | Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I3SNC8|I3SNC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0492900 | 9 | ||
| – | Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|G7L8Y7|G7L8Y7_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi6g1v0042200 | 9 | ||
| – | Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|G7L8Y7|G7L8Y7_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi6g1v0042200 | 9 | ||
| – | Trafficking protein particle complex subunit 4; TAIR: AT5G02280.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q2TBL9|TPPC4_BOVIN Trafficking protein particle complex subunit 4; TrEMBL-Plants: tr|I1LLI8|I1LLI8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0042200 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd14856 | CDD | 1 | 8.33 |