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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3241040 |
| Transcript ID | Lj3g3v3241040.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X3 [Cicer arietinum] gi|502148270|ref|XP_004507101.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 241 | 235 | 3.70E-67 | – | |
| PANTHER | 7 | 241 | 235 | 3.70E-67 | ||
| MobiDBLite | 90 | 137 | 48 | – | – | |
| Gene3D | 191 | 240 | 50 | 1.00E-15 | ||
| SUPERFAMILY | 192 | 243 | 52 | 7.34E-17 | – | |
| Pfam | 195 | 236 | 42 | 4.70E-12 | ||
| CDD | 196 | 240 | 45 | 1.13E-09 | – | |
| ProSiteProfiles | 196 | 236 | 41 | 11.102 | ||
| SMART | 196 | 236 | 41 | 1.40E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. | ||
| Biological process | Negative regulation of organ growth | Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organ of an organism. |
Expression pattern of Lj3g3v3241040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3241040.1, powered by CORGI.
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