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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0134610 |
| Transcript ID | Lj4g3v0134610.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucyl-tRNA synthetase-like [Glycine max] gi|356522021|ref|XP_003529648.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 19 | 19 | 1.10E-155 | ||
| Gene3D | 1 | 34 | 34 | 5.50E-56 | ||
| PANTHER | 1 | 19 | 19 | 1.10E-155 | – | |
| SUPERFAMILY | 2 | 38 | 37 | 3.66E-47 | – | |
| PRINTS | 27 | 46 | 20 | 1.20E-33 | ||
| Pfam | 33 | 227 | 195 | 3.20E-61 | ||
| Gene3D | 35 | 248 | 214 | 6.10E-55 | ||
| SUPERFAMILY | 38 | 239 | 202 | 5.65E-49 | ||
| PANTHER | 57 | 82 | 26 | 1.10E-155 | – | |
| PANTHER | 57 | 82 | 26 | 1.10E-155 | ||
| PANTHER | 105 | 281 | 177 | 1.10E-155 | – | |
| PANTHER | 105 | 281 | 177 | 1.10E-155 | ||
| SUPERFAMILY | 240 | 402 | 163 | 3.66E-47 | – | |
| Pfam | 240 | 400 | 161 | 1.60E-05 | ||
| Gene3D | 249 | 400 | 152 | 5.50E-56 | ||
| PANTHER | 299 | 402 | 104 | 1.10E-155 | ||
| PANTHER | 299 | 402 | 104 | 1.10E-155 | – | |
| PRINTS | 315 | 333 | 19 | 1.20E-33 | ||
| PRINTS | 354 | 376 | 23 | 1.20E-33 | ||
| PRINTS | 387 | 397 | 11 | 1.20E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Aminoacyl-tRNA editing activity | The hydrolysis of an incorrectly aminoacylated tRNA. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Leucine-tRNA ligase activity | Catalysis of the reaction: L-leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H(+) + Leu-tRNA(Leu). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
| Biological process | Leucyl-tRNA aminoacylation | The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. The leucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a leucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification. |
Expression pattern of Lj4g3v0134610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0134610.1, powered by CORGI.
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