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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0137730 |
| Transcript ID | Lj4g3v0137730.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | aspartic acid protease [Phaseolus vulgaris] gi|223929912|gb|ACN24614.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 22 | 22 | 6 | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| PANTHER | 7 | 141 | 135 | 3.00E-70 | ||
| PANTHER | 7 | 141 | 135 | 3.00E-70 | – | |
| SUPERFAMILY | 9 | 145 | 137 | 9.53E-31 | ||
| Phobius | 18 | 22 | 5 | – | – | |
| Phobius | 23 | 147 | 125 | – | – | |
| Gene3D | 79 | 144 | 66 | 4.00E-25 | ||
| Pfam | 88 | 144 | 57 | 5.30E-26 | ||
| ProSiteProfiles | 89 | 147 | 59 | 22.918 | ||
| ProSitePatterns | 104 | 115 | 12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj4g3v0137730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0137730.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.