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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0153960 |
| Transcript ID | Lj4g3v0153960.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sodium/hydrogen exchanger 7-like isoform X2 [Cicer arietinum] gi|502141734|ref|XP_004504612.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 477 | 477 | 3.80E-156 | – | |
| PANTHER | 1 | 477 | 477 | 3.80E-156 | ||
| Phobius | 1 | 5 | 5 | – | – | |
| TMHMM | 4 | 23 | 20 | – | – | |
| Pfam | 4 | 133 | 130 | 2.50E-13 | ||
| Phobius | 6 | 23 | 18 | – | – | |
| Phobius | 24 | 34 | 11 | – | – | |
| Phobius | 35 | 60 | 26 | – | – | |
| TMHMM | 35 | 57 | 23 | – | – | |
| Phobius | 61 | 71 | 11 | – | – | |
| TMHMM | 72 | 94 | 23 | – | – | |
| Phobius | 72 | 90 | 19 | – | – | |
| Phobius | 91 | 101 | 11 | – | – | |
| Phobius | 102 | 124 | 23 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 125 | 750 | 626 | – | – | |
| Gene3D | 420 | 539 | 120 | 1.80E-06 | ||
| SUPERFAMILY | 422 | 542 | 121 | 1.70E-13 | ||
| ProSiteProfiles | 424 | 519 | 96 | 7.848 | ||
| MobiDBLite | 715 | 750 | 36 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0153960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0153960.1, powered by CORGI.
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