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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0153960 |
| Transcript ID | Lj4g3v0153960.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sodium/hydrogen exchanger 7-like isoform X2 [Cicer arietinum] gi|502141734|ref|XP_004504612.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | – | – | |
| PANTHER | 41 | 807 | 767 | 0 | ||
| PANTHER | 41 | 807 | 767 | 0 | – | |
| Phobius | 48 | 65 | 18 | – | – | |
| TMHMM | 48 | 65 | 18 | – | – | |
| Pfam | 51 | 460 | 410 | 5.40E-64 | ||
| Phobius | 66 | 71 | 6 | – | – | |
| TMHMM | 72 | 91 | 20 | – | – | |
| Phobius | 72 | 91 | 20 | – | – | |
| Phobius | 92 | 110 | 19 | – | – | |
| TMHMM | 111 | 128 | 18 | – | – | |
| Phobius | 111 | 128 | 18 | – | – | |
| Phobius | 129 | 139 | 11 | – | – | |
| Phobius | 140 | 159 | 20 | – | – | |
| TMHMM | 141 | 163 | 23 | – | – | |
| Phobius | 160 | 170 | 11 | – | – | |
| Phobius | 171 | 191 | 21 | – | – | |
| Phobius | 192 | 230 | 39 | – | – | |
| TMHMM | 214 | 236 | 23 | – | – | |
| Phobius | 231 | 254 | 24 | – | – | |
| TMHMM | 243 | 265 | 23 | – | – | |
| Phobius | 255 | 259 | 5 | – | – | |
| Phobius | 260 | 284 | 25 | – | – | |
| TMHMM | 270 | 287 | 18 | – | – | |
| Phobius | 285 | 290 | 6 | – | – | |
| Phobius | 291 | 309 | 19 | – | – | |
| TMHMM | 294 | 313 | 20 | – | – | |
| Phobius | 310 | 328 | 19 | – | – | |
| TMHMM | 328 | 350 | 23 | – | – | |
| Phobius | 329 | 350 | 22 | – | – | |
| Phobius | 351 | 361 | 11 | – | – | |
| Phobius | 362 | 387 | 26 | – | – | |
| TMHMM | 362 | 384 | 23 | – | – | |
| Phobius | 388 | 398 | 11 | – | – | |
| Phobius | 399 | 417 | 19 | – | – | |
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 418 | 428 | 11 | – | – | |
| Phobius | 429 | 451 | 23 | – | – | |
| TMHMM | 433 | 455 | 23 | – | – | |
| Phobius | 452 | 1158 | 707 | – | – | |
| Gene3D | 747 | 865 | 119 | 6.70E-08 | ||
| SUPERFAMILY | 749 | 868 | 120 | 5.24E-13 | ||
| ProSiteProfiles | 751 | 854 | 104 | 8.837 | ||
| CDD | 751 | 860 | 110 | 1.41E-05 | – | |
| MobiDBLite | 1065 | 1084 | 20 | – | – | |
| MobiDBLite | 1093 | 1158 | 66 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0153960.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0153960.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.