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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0166410 |
| Transcript ID | Lj4g3v0166410.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Os06g0565000 [Oryza sativa Japonica Group] gi|115468576|ref|NP_001057887.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 39 | 22 | 0 | – | |
| PANTHER | 18 | 39 | 22 | 0 | – | |
| PANTHER | 60 | 91 | 32 | 0 | – | |
| PANTHER | 60 | 91 | 32 | 0 | – | |
| ProSiteProfiles | 177 | 211 | 35 | 7.87 | ||
| Pfam | 183 | 208 | 26 | 0.32 | ||
| Gene3D | 187 | 366 | 180 | 3.40E-04 | ||
| PANTHER | 191 | 743 | 553 | 0 | – | |
| PANTHER | 191 | 743 | 553 | 0 | – | |
| Pfam | 211 | 259 | 49 | 9.20E-09 | ||
| ProSiteProfiles | 212 | 246 | 35 | 9.12 | ||
| ProSiteProfiles | 247 | 281 | 35 | 12.178 | ||
| TIGRFAM | 249 | 283 | 35 | 9.70E-08 | ||
| SUPERFAMILY | 252 | 349 | 98 | 4.97E-06 | – | |
| Pfam | 281 | 330 | 50 | 1.80E-19 | ||
| ProSiteProfiles | 282 | 316 | 35 | 14.261 | ||
| TIGRFAM | 284 | 318 | 35 | 6.70E-10 | ||
| ProSiteProfiles | 317 | 351 | 35 | 13.077 | ||
| TIGRFAM | 319 | 353 | 35 | 3.50E-08 | ||
| Pfam | 351 | 400 | 50 | 1.50E-18 | ||
| ProSiteProfiles | 352 | 386 | 35 | 13.428 | ||
| TIGRFAM | 354 | 388 | 35 | 8.10E-10 | ||
| Gene3D | 367 | 474 | 108 | 5.70E-10 | ||
| ProSiteProfiles | 387 | 421 | 35 | 11.63 | ||
| TIGRFAM | 389 | 422 | 34 | 5.90E-05 | ||
| Pfam | 418 | 447 | 30 | 5.00E-11 | ||
| ProSiteProfiles | 422 | 456 | 35 | 12.057 | ||
| TIGRFAM | 424 | 458 | 35 | 1.10E-06 | ||
| Pfam | 456 | 505 | 50 | 5.50E-10 | ||
| SUPERFAMILY | 456 | 558 | 103 | 4.97E-06 | – | |
| ProSiteProfiles | 457 | 491 | 35 | 11.805 | ||
| TIGRFAM | 460 | 492 | 33 | 1.10E-06 | ||
| ProSiteProfiles | 492 | 526 | 35 | 8.714 | ||
| Pfam | 527 | 575 | 49 | 1.90E-14 | ||
| ProSiteProfiles | 527 | 561 | 35 | 11.334 | ||
| TIGRFAM | 529 | 560 | 32 | 2.90E-07 | ||
| ProSiteProfiles | 562 | 596 | 35 | 12.079 | ||
| TIGRFAM | 564 | 597 | 34 | 4.90E-06 | ||
| Gene3D | 565 | 726 | 162 | 5.70E-10 | ||
| Pfam | 596 | 642 | 47 | 2.30E-12 | ||
| ProSiteProfiles | 597 | 631 | 35 | 11.203 | ||
| TIGRFAM | 600 | 632 | 33 | 3.10E-08 | ||
| ProSiteProfiles | 632 | 666 | 35 | 10.194 | ||
| TIGRFAM | 635 | 667 | 33 | 1.80E-04 | ||
| ProSiteProfiles | 667 | 701 | 35 | 10.578 | ||
| Pfam | 670 | 699 | 30 | 9.90E-04 | ||
| ProSiteProfiles | 702 | 736 | 35 | 9.361 | ||
| Pfam | 708 | 734 | 27 | 0.071 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0166410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0166410.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.