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Lj4g3v0216610.1

Overview

Field Value
Gene ID Lj4g3v0216610
Transcript ID Lj4g3v0216610.1
Lotus japonicus genome version MG20 v3.0
Description Protein kinase 2B [Medicago truncatula] gi|357493723|ref|XP_003617150.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 25 25 – –
MobiDBLite
mobidb-lite
14 33 20 – –
PANTHER
PTHR27001:SF99
18 279 262 4.50E-174 –
PANTHER
PTHR27001
18 279 262 4.50E-174 –
SUPERFAMILY
SSF56112
38 277 240 4.53E-75
IPR011009
Gene3D
G3DSA:2.60.120.200
45 79 35 5.80E-09
IPR013320
ProSiteProfiles
PS50011
66 279 214 37.912
IPR000719
SMART
SM00220
66 277 212 7.90E-25
IPR000719
Pfam
PF07714
69 272 204 8.50E-45
IPR001245
ProSitePatterns
PS00107
72 105 34 –
IPR017441
Gene3D
G3DSA:3.30.200.20
80 138 59 6.40E-23 –
Gene3D
G3DSA:1.10.510.10
139 277 139 9.10E-43 –
ProSitePatterns
PS00108
195 207 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj4g3v0216610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0216610.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.