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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0300480 |
| Transcript ID | Lj4g3v0300480.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] gi|225446327|ref|XP_002273773.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 613 | 613 | – | – | |
| SUPERFAMILY | 194 | 348 | 155 | 9.78E-17 | ||
| Gene3D | 198 | 573 | 376 | 2.00E-55 | ||
| PANTHER | 207 | 766 | 560 | 7.90E-166 | ||
| PANTHER | 207 | 766 | 560 | 7.90E-166 | – | |
| ProSiteProfiles | 214 | 246 | 33 | 9.484 | ||
| SMART | 214 | 243 | 30 | 0.97 | ||
| ProSiteProfiles | 214 | 551 | 338 | 39.868 | ||
| Pfam | 219 | 318 | 100 | 3.40E-09 | ||
| CDD | 245 | 457 | 213 | 2.21E-16 | – | |
| ProSiteProfiles | 248 | 269 | 22 | 9.965 | ||
| SMART | 248 | 281 | 34 | 0.03 | ||
| SMART | 292 | 321 | 30 | 2.8 | ||
| SUPERFAMILY | 331 | 564 | 234 | 1.32E-32 | ||
| SMART | 334 | 365 | 32 | 1300 | ||
| Pfam | 341 | 427 | 87 | 2.00E-07 | ||
| SMART | 368 | 398 | 31 | 81 | ||
| CDD | 399 | 532 | 134 | 2.29E-26 | – | |
| SMART | 402 | 431 | 30 | 0.0026 | ||
| ProSiteProfiles | 402 | 428 | 27 | 9.057 | ||
| SMART | 436 | 465 | 30 | 5.1 | ||
| SMART | 472 | 502 | 31 | 540 | ||
| Pfam | 512 | 532 | 21 | 0.026 | ||
| SMART | 512 | 542 | 31 | 480 | ||
| Pfam | 606 | 714 | 109 | 1.60E-22 | ||
| TMHMM | 614 | 636 | 23 | – | – | |
| Phobius | 614 | 632 | 19 | – | – | |
| Phobius | 633 | 651 | 19 | – | – | |
| Phobius | 652 | 678 | 27 | – | – | |
| TMHMM | 656 | 678 | 23 | – | – | |
| Phobius | 679 | 684 | 6 | – | – | |
| Phobius | 685 | 715 | 31 | – | – | |
| TMHMM | 693 | 715 | 23 | – | – | |
| Phobius | 716 | 720 | 5 | – | – | |
| Phobius | 721 | 741 | 21 | – | – | |
| TMHMM | 722 | 744 | 23 | – | – | |
| Phobius | 742 | 752 | 11 | – | – | |
| Phobius | 753 | 770 | 18 | – | – | |
| Phobius | 771 | 775 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Regulation of defense response | Any process that modulates the frequency, rate or extent of a defense response. | ||
| Biological process | Cellular response to salicylic acid stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus. | ||
| Biological process | Regulation of salicylic acid mediated signaling pathway | Any process that modulates the frequency, rate or extent of salicylic acid mediated signaling pathway. |
Expression pattern of Lj4g3v0300480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0300480.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.