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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0412710 |
| Transcript ID | Lj4g3v0412710.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DUF21 domain-containing protein At2g14520-like [Glycine max] gi|356524776|ref|XP_003531004.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 311 | 311 | 9.40E-274 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 1 | 311 | 311 | 9.40E-274 | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 12 | 39 | 28 | – | – | |
| Pfam | 17 | 189 | 173 | 6.80E-40 | ||
| Phobius | 40 | 70 | 31 | – | – | |
| Phobius | 71 | 91 | 21 | – | – | |
| TMHMM | 90 | 112 | 23 | – | – | |
| Phobius | 92 | 96 | 5 | – | – | |
| Phobius | 97 | 116 | 20 | – | – | |
| Phobius | 117 | 122 | 6 | – | – | |
| Phobius | 123 | 146 | 24 | – | – | |
| TMHMM | 125 | 147 | 23 | – | – | |
| Phobius | 147 | 425 | 279 | – | – | |
| Gene3D | 194 | 306 | 113 | 7.10E-08 | – | |
| SUPERFAMILY | 194 | 308 | 115 | 1.60E-18 | – | |
| ProSiteProfiles | 210 | 271 | 62 | 8.316 | ||
| CDD | 217 | 306 | 90 | 2.14E-22 | – | |
| ProSiteProfiles | 275 | 313 | 39 | 5.928 | ||
| PANTHER | 383 | 424 | 42 | 9.40E-274 | – | |
| PANTHER | 383 | 424 | 42 | 9.40E-274 | – | |
| SUPERFAMILY | 392 | 411 | 20 | 1.60E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v0412710.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0412710.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.