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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0450840 |
| Transcript ID | Lj4g3v0450840.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1-like [Glycine max] gi|356521333|ref|XP_003529311.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 451 | 451 | 0 | – | |
| PANTHER | 1 | 451 | 451 | 0 | – | |
| SUPERFAMILY | 136 | 175 | 40 | 7.62E-19 | ||
| ProSiteProfiles | 137 | 385 | 249 | 15.613 | ||
| Gene3D | 142 | 170 | 29 | 1.20E-12 | ||
| SMART | 206 | 372 | 167 | 2.00E-16 | ||
| Gene3D | 251 | 361 | 111 | 1.20E-12 | ||
| Pfam | 251 | 361 | 111 | 1.10E-06 | ||
| SUPERFAMILY | 255 | 385 | 131 | 7.62E-19 | ||
| PANTHER | 514 | 549 | 36 | 0 | – | |
| PANTHER | 514 | 549 | 36 | 0 | – | |
| MobiDBLite | 521 | 577 | 57 | – | – | |
| PANTHER | 596 | 951 | 356 | 0 | – | |
| PANTHER | 596 | 951 | 356 | 0 | – | |
| MobiDBLite | 645 | 691 | 47 | – | – | |
| SMART | 700 | 764 | 65 | 4.00E-05 | ||
| SUPERFAMILY | 703 | 763 | 61 | 1.57E-08 | – | |
| CDD | 703 | 763 | 61 | 1.73E-05 | – | |
| Pfam | 704 | 763 | 60 | 9.60E-07 | ||
| ProSiteProfiles | 728 | 765 | 38 | 10.703 | ||
| Gene3D | 728 | 762 | 35 | 1.30E-05 | ||
| SUPERFAMILY | 833 | 915 | 83 | 8.77E-13 | – | |
| Gene3D | 834 | 905 | 72 | 6.10E-06 | ||
| ProSiteProfiles | 835 | 906 | 72 | 11.601 | ||
| SMART | 836 | 905 | 70 | 4.40E-06 | ||
| CDD | 837 | 901 | 65 | 1.09E-05 | – | |
| Pfam | 837 | 902 | 66 | 5.50E-06 | ||
| MobiDBLite | 911 | 955 | 45 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v0450840.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0450840.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.