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Lj4g3v0451300.2

Overview

Field Value
Gene ID Lj4g3v0451300
Transcript ID Lj4g3v0451300.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: GTP-binding protein At2g22870-like [Cicer arietinum] gi|502142648|ref|XP_004505058.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11649:SF49
1 217 217 9.00E-169 –
PANTHER
PTHR11649
1 217 217 9.00E-169 –
TIGRFAM
TIGR03598
23 207 185 5.40E-59
IPR019987
Gene3D
G3DSA:3.40.50.300
26 212 187 1.10E-40
IPR027417
Hamap
MF_00321
27 214 188 23.66
IPR019987
SUPERFAMILY
SSF52540
27 212 186 1.23E-37
IPR027417
ProSiteProfiles
PS51706
38 216 179 35.848
IPR030393
CDD
cd01876
41 213 173 1.49E-69 –
Pfam
PF01926
42 159 118 2.50E-21
IPR006073

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj4g3v0451300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0451300.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.