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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0633470 |
| Transcript ID | Lj4g3v0633470.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: auxin efflux carrier component 3-like [Cicer arietinum] gi|502143228|ref|XP_004505266.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| TIGRFAM | 1 | 645 | 645 | 7.50E-165 | ||
| PANTHER | 2 | 292 | 291 | 0 | – | |
| PANTHER | 2 | 292 | 291 | 0 | – | |
| TMHMM | 4 | 26 | 23 | – | – | |
| Phobius | 6 | 28 | 23 | – | – | |
| Pfam | 9 | 640 | 632 | 4.90E-195 | ||
| Phobius | 29 | 39 | 11 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 40 | 59 | 20 | – | – | |
| Phobius | 60 | 70 | 11 | – | – | |
| Phobius | 71 | 92 | 22 | – | – | |
| TMHMM | 71 | 93 | 23 | – | – | |
| Phobius | 93 | 103 | 11 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| Phobius | 104 | 126 | 23 | – | – | |
| Phobius | 127 | 131 | 5 | – | – | |
| Phobius | 132 | 152 | 21 | – | – | |
| TMHMM | 132 | 154 | 23 | – | – | |
| Phobius | 153 | 502 | 350 | – | – | |
| MobiDBLite | 273 | 357 | 85 | – | – | |
| PANTHER | 362 | 392 | 31 | 0 | – | |
| PANTHER | 362 | 392 | 31 | 0 | – | |
| PANTHER | 420 | 455 | 36 | 0 | – | |
| PANTHER | 420 | 455 | 36 | 0 | – | |
| MobiDBLite | 439 | 461 | 23 | – | – | |
| PANTHER | 476 | 645 | 170 | 0 | – | |
| PANTHER | 476 | 645 | 170 | 0 | – | |
| Phobius | 503 | 520 | 18 | – | – | |
| Phobius | 521 | 531 | 11 | – | – | |
| TMHMM | 530 | 552 | 23 | – | – | |
| Phobius | 532 | 551 | 20 | – | – | |
| Phobius | 552 | 562 | 11 | – | – | |
| TMHMM | 562 | 584 | 23 | – | – | |
| Phobius | 563 | 585 | 23 | – | – | |
| Phobius | 586 | 590 | 5 | – | – | |
| TMHMM | 589 | 611 | 23 | – | – | |
| Phobius | 591 | 611 | 21 | – | – | |
| Phobius | 612 | 617 | 6 | – | – | |
| Phobius | 618 | 642 | 25 | – | – | |
| TMHMM | 621 | 643 | 23 | – | – | |
| Phobius | 643 | 645 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0633470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0633470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.