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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0758130 |
| Transcript ID | Lj4g3v0758130.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-transporting ATPase 2, plasma membrane-type-like [Cicer arietinum] gi|502152734|ref|XP_004509067.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 126 | 126 | – | – | |
| PANTHER | 13 | 843 | 831 | 0 | – | |
| PANTHER | 13 | 843 | 831 | 0 | – | |
| TIGRFAM | 65 | 968 | 904 | 0 | ||
| SMART | 70 | 144 | 75 | 0.0036 | ||
| Pfam | 71 | 139 | 69 | 6.30E-12 | ||
| SUPERFAMILY | 71 | 190 | 120 | 1.57E-111 | – | |
| Phobius | 127 | 145 | 19 | – | – | |
| TMHMM | 129 | 146 | 18 | – | – | |
| Phobius | 146 | 156 | 11 | – | – | |
| TMHMM | 156 | 173 | 18 | – | – | |
| Phobius | 157 | 175 | 19 | – | – | |
| Pfam | 159 | 398 | 240 | 1.30E-43 | ||
| Phobius | 176 | 308 | 133 | – | – | |
| SUPERFAMILY | 193 | 287 | 95 | 4.71E-25 | – | |
| Gene3D | 234 | 291 | 58 | 8.30E-140 | ||
| PRINTS | 238 | 252 | 15 | 3.40E-37 | – | |
| SUPERFAMILY | 290 | 401 | 112 | 1.57E-111 | – | |
| TMHMM | 303 | 325 | 23 | – | – | |
| Phobius | 309 | 330 | 22 | – | – | |
| Phobius | 331 | 349 | 19 | – | – | |
| TIGRFAM | 340 | 442 | 103 | 1.60E-22 | ||
| Phobius | 350 | 380 | 31 | – | – | |
| TMHMM | 353 | 375 | 23 | – | – | |
| Phobius | 381 | 771 | 391 | – | – | |
| Gene3D | 397 | 611 | 215 | 3.70E-54 | ||
| SUPERFAMILY | 405 | 425 | 21 | 9.55E-57 | ||
| PRINTS | 407 | 421 | 15 | 3.40E-37 | – | |
| ProSitePatterns | 409 | 415 | 7 | – | ||
| SUPERFAMILY | 413 | 616 | 204 | 1.68E-47 | ||
| Pfam | 468 | 544 | 77 | 4.30E-19 | – | |
| TIGRFAM | 499 | 652 | 154 | 5.50E-20 | ||
| SUPERFAMILY | 560 | 812 | 253 | 9.55E-57 | ||
| PRINTS | 563 | 581 | 19 | 1.00E-13 | ||
| PRINTS | 604 | 615 | 12 | 3.40E-37 | – | |
| CDD | 612 | 726 | 115 | 5.11E-07 | – | |
| PRINTS | 626 | 636 | 11 | 3.40E-37 | – | |
| TIGRFAM | 677 | 793 | 117 | 4.60E-29 | ||
| Gene3D | 685 | 967 | 283 | 8.30E-140 | ||
| PRINTS | 707 | 726 | 20 | 3.40E-37 | – | |
| PRINTS | 707 | 723 | 17 | 1.00E-13 | ||
| PRINTS | 731 | 743 | 13 | 3.40E-37 | – | |
| PRINTS | 739 | 764 | 26 | 1.00E-13 | ||
| SUPERFAMILY | 757 | 967 | 211 | 1.57E-111 | – | |
| Phobius | 772 | 792 | 21 | – | – | |
| TMHMM | 774 | 796 | 23 | – | – | |
| Pfam | 792 | 964 | 173 | 1.10E-40 | ||
| Phobius | 793 | 797 | 5 | – | – | |
| Phobius | 798 | 816 | 19 | – | – | |
| Phobius | 817 | 847 | 31 | – | – | |
| TMHMM | 839 | 858 | 20 | – | – | |
| Phobius | 848 | 867 | 20 | – | – | |
| PANTHER | 859 | 968 | 110 | 0 | – | |
| PANTHER | 859 | 968 | 110 | 0 | – | |
| TMHMM | 865 | 887 | 23 | – | – | |
| Phobius | 868 | 872 | 5 | – | – | |
| Phobius | 873 | 892 | 20 | – | – | |
| Phobius | 893 | 912 | 20 | – | – | |
| TMHMM | 912 | 934 | 23 | – | – | |
| Phobius | 913 | 932 | 20 | – | – | |
| Phobius | 933 | 943 | 11 | – | – | |
| TMHMM | 941 | 963 | 23 | – | – | |
| Phobius | 944 | 963 | 20 | – | – | |
| Phobius | 964 | 968 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Calcium-transporting ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Calcium ion transmembrane transport | A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj4g3v0758130.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0758130.1, powered by CORGI.
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