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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0877830 |
| Transcript ID | Lj4g3v0877830.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TATA-binding protein-associated factor 172-like [Glycine max] gi|356543311|ref|XP_003540105.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 87 | 87 | 14.709 | ||
| Pfam | 5 | 219 | 215 | 1.90E-41 | ||
| Gene3D | 8 | 84 | 77 | 1.30E-09 | ||
| SUPERFAMILY | 9 | 137 | 129 | 3.32E-31 | ||
| CDD | 9 | 69 | 61 | 3.34E-07 | – | |
| PANTHER | 11 | 105 | 95 | 2.00E-119 | – | |
| PANTHER | 11 | 105 | 95 | 2.00E-119 | – | |
| PANTHER | 122 | 182 | 61 | 2.00E-119 | – | |
| PANTHER | 122 | 182 | 61 | 2.00E-119 | – | |
| SUPERFAMILY | 138 | 383 | 246 | 7.15E-39 | ||
| MobiDBLite | 176 | 195 | 20 | – | – | |
| PANTHER | 199 | 383 | 185 | 2.00E-119 | – | |
| PANTHER | 199 | 383 | 185 | 2.00E-119 | – | |
| Gene3D | 251 | 383 | 133 | 6.90E-12 | ||
| CDD | 253 | 383 | 131 | 6.97E-19 | – | |
| ProSiteProfiles | 255 | 383 | 129 | 11.888 | ||
| Pfam | 281 | 383 | 103 | 4.40E-12 | ||
| SMART | 297 | 383 | 87 | 2.70E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj4g3v0877830.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0877830.2, powered by CORGI.
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