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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1085060 |
| Transcript ID | Lj4g3v1085060.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: high affinity nitrate transporter 2.5-like [Glycine max] gi|356526779|ref|XP_003531994.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | – | – | |
| PANTHER | 9 | 507 | 499 | 0 | – | |
| PANTHER | 9 | 507 | 499 | 0 | – | |
| SUPERFAMILY | 33 | 441 | 409 | 1.09E-48 | ||
| Gene3D | 41 | 230 | 190 | 1.60E-17 | – | |
| ProSiteProfiles | 43 | 444 | 402 | 10.186 | ||
| TMHMM | 44 | 66 | 23 | – | – | |
| CDD | 46 | 380 | 335 | 1.42E-06 | ||
| Phobius | 46 | 67 | 22 | – | – | |
| Pfam | 48 | 404 | 357 | 3.10E-21 | ||
| Phobius | 68 | 78 | 11 | – | – | |
| TMHMM | 79 | 98 | 20 | – | – | |
| Phobius | 79 | 96 | 18 | – | – | |
| Phobius | 97 | 107 | 11 | – | – | |
| Phobius | 108 | 127 | 20 | – | – | |
| TMHMM | 108 | 126 | 19 | – | – | |
| Phobius | 128 | 133 | 6 | – | – | |
| TMHMM | 133 | 155 | 23 | – | – | |
| Phobius | 134 | 153 | 20 | – | – | |
| Phobius | 154 | 172 | 19 | – | – | |
| TMHMM | 170 | 192 | 23 | – | – | |
| Phobius | 173 | 193 | 21 | – | – | |
| Phobius | 194 | 204 | 11 | – | – | |
| Phobius | 205 | 225 | 21 | – | – | |
| TMHMM | 205 | 224 | 20 | – | – | |
| Phobius | 226 | 257 | 32 | – | – | |
| Gene3D | 257 | 441 | 185 | 1.40E-15 | – | |
| Phobius | 258 | 277 | 20 | – | – | |
| TMHMM | 260 | 282 | 23 | – | – | |
| Phobius | 278 | 288 | 11 | – | – | |
| Phobius | 289 | 309 | 21 | – | – | |
| Phobius | 310 | 328 | 19 | – | – | |
| Phobius | 329 | 351 | 23 | – | – | |
| TMHMM | 331 | 353 | 23 | – | – | |
| Phobius | 352 | 357 | 6 | – | – | |
| Phobius | 358 | 382 | 25 | – | – | |
| TMHMM | 358 | 380 | 23 | – | – | |
| Phobius | 383 | 387 | 5 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 388 | 409 | 22 | – | – | |
| Phobius | 410 | 420 | 11 | – | – | |
| TMHMM | 419 | 441 | 23 | – | – | |
| Phobius | 421 | 440 | 20 | – | – | |
| Phobius | 441 | 507 | 67 | – | – | |
| MobiDBLite | 466 | 507 | 42 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1085060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1085060.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.